Lepisosteus oculatus (spotted gar): 102696900
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Entry
102696900 CDS
T07349
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102696900 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102696900 (mbd4)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102696900 (mbd4)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102696900 (mbd4)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102696900 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102696900
NCBI-ProteinID:
XP_006631030
Ensembl:
ENSLOCG00000013054
LinkDB
All DBs
Position
LG5:40484753..40489146
Genome browser
AA seq
592 aa
AA seq
DB search
MHEFELPRLRMDDLNSRTTVSETATTEAIACEEPSLSDEDQQEKAAPKQSPSPDSCMETC
CCLGVPPGWVKMVKQRRSGKTAGKVDVYIISPQGGKFRSRASLHVYLQNNKELCLKGADF
DFSVPGKDKQLTKPQRTKKKKALQLSETVLDSTTDTKITAEEEHLSPSSVSEELSGHDAA
TDGVFSAPCAEKSKSSESESTSCRARAKRRHSLTKLTPAGPQRGQKQRKDPSSRVRKAGA
KRAVGKRGNKLTPGSEMEEGQSQRHTGDQKETQGGLLKDKLLRLAQESEVNDVNALTVSG
ERGENQIANHTGDQKETEKGLLKDKLLRLTQISEADKGAELALSPEGENESGEVVCDQPE
ASAPGKSALQPVSKNAAETQQAVVGPETESALEDGDSLPPGDSGTFTSVKQQQSSCGIKM
LSEKRKTSQYFTGKLAREAPSPPRRKAFKKWTPPRSPFALVQETLFHDPWKLLIATIFLN
RTSGKMAIPVLWEFFGRYPSPEVARVSDWKEMAELLKPLGLNELRAKTIVRFSDEYLTKH
WKYPIELHGIGKYGNDSYRIFCVNEWKQVDPQDHKLNLYHAWLRENHEHLGI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaatttgagttaccgcgtttacggatggatgatcttaatagcagaactactgtc
agtgaaactgctaccacagaagcaatagcgtgtgaagagccctctttgtcagatgaggac
cagcaagagaaagctgcaccaaagcagagtcccagccccgactcgtgtatggagacctgc
tgctgtctcggagtcccgccaggctgggttaaaatggtgaaacagaggcgatctggaaaa
acggcagggaaagtagacgtatatatcatcagtccacagggagggaaattcagatcaaga
gcttcactccatgtctaccttcagaataacaaagaactctgtctcaagggtgcagatttt
gatttctctgtacctgggaaggacaaacagttaacaaaacctcagaggacaaaaaagaag
aaagctctccaactttcagaaaccgtcttggacagcacaactgacactaagattacagcc
gaagaggaacacttgtcacccagcagtgtgtcagaagagctgtctggacatgatgctgcc
actgacggggtcttttctgcgccttgtgctgagaaatccaagtcttcagaatctgaaagc
acaagttgcagagccagggctaaacgtcggcactctctgacaaagctcactcccgcagga
ccacagagaggacagaaacagaggaaggatcccagcagtagggttagaaaagccggtgct
aaaagagcagtgggcaaacggggaaataaactgactccgggcagtgaaatggaagaaggg
caaagtcaacgccacactggagaccaaaaagagactcaaggggggcttttaaaagacaag
cttctcagactggcacaggaaagtgaggtaaatgacgtaaacgcactgactgtgagcggt
gaaagaggagaaaatcaaattgcaaaccacactggagatcaaaaagagactgaaaaggga
cttttaaaggataagcttctcagactgacccagataagtgaagcggataaaggagcagag
ctcgcactttccccagaaggtgaaaatgagtcgggagaagtggtgtgtgaccagcctgag
gcctctgccccagggaaaagtgccttacagcctgtgtctaagaacgctgcagagacacag
caagctgttgtcggacctgaaactgagtctgcgctagaagatggtgattcacttcctccg
ggggactcggggacatttacatcagtgaaacagcagcaaagcagttgtggcataaaaatg
ctgtcagagaaaagaaaaacaagccagtacttcactggaaaattagccagagaagctcca
agtccacccagacgcaaggcctttaagaaatggactccgcctcgctctccttttgccttg
gtacaggagactcttttccatgatccctggaagcttctgatagccaccattttcctcaat
agaaccagcggtaagatggcaatccctgtgctgtgggagttctttgggcgttacccgtct
cctgaggtggcccgtgtcagcgactggaaagaaatggctgaactgctgaaacctctgggc
ctcaatgaactcagagccaaaacaattgtgaggttttcagatgaatacttaacaaaacac
tggaagtaccccatcgagctccatggtataggaaagtatggcaacgactcctacaggata
ttctgtgtcaatgaatggaaacaggttgatccccaagatcacaagctgaacttgtatcat
gcatggctccgggaaaaccacgagcacctgggtatctga
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