Lepisosteus oculatus (spotted gar): 102696936
Help
Entry
102696936 CDS
T07349
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102696936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
URGCP_GTPase
Virul_Fac
Motif
Other DBs
NCBI-GeneID:
102696936
NCBI-ProteinID:
XP_006641588
Ensembl:
ENSLOCG00000003417
UniProt:
W5M6P8
LinkDB
All DBs
Position
LG24:complement(104805..115011)
Genome browser
AA seq
627 aa
AA seq
DB search
MASNTLSMSAPVCLVENGEDGKLHVNRQSLELLGKIEQQVVVVSVVGLYRTGKSYLMNKL
AGTKKGFSLGSTIQSHTKGIWMWCVPHPNKPDHTLVLLDTEGLGDVEKGDEKNDNWIFSL
AVLLSSTLVYNSTGTINNNALQQLHYVTELTEHIRVKSHTRNEEDNSAEFARFFPSFVWT
VRDFTLELAIDGKVVTADQYLDNALKLRPGTDKKSQEYNLPRECIRNYFPSRKCFVFTRP
TTPEKMRLMEELSDTDLDPCFVQQAKDFCHYVFTSAQTKTMKGGYTVTGRLLGSLAETYV
EAIRSGQIPCLDNAVLALAEIQNTTALKQAVSYYVNEMNEWVAYPTETQEELSQLHGQFE
KKAVKMFINHSFKDEDQKYQIELMKSLQNEYESLCMKNEEASRKACSDIIDEVFQIVEEN
LSAGSYMVAGGYKKFKTDMDVYISIYMAMPNKGIKAEEVLKEYLAPKESIGRAILAADKS
LSEAERRIEEEWARSAAAERDRRAEEEKKWVLQRQIQDQERTYRENMEQLLAKMEQDRKN
LLKEQDKVLEAKLKEQRDLLEQGFRDRADRMNADITSLKREKEETKSKSQSIVSTVVETV
GNVASLFLPGIVGKAVGIGSRLLSRFF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaacacactgtcgatgtctgcccccgtgtgccttgttgaaaatggagaagat
ggaaagcttcatgtcaacagacagtctctggagcttttggggaagattgaacagcaagta
gttgtggtgtcagtagtgggattataccgcactggcaaatcctacctcatgaacaaactg
gcaggaacgaaaaagggattttccctggggtccaccatacagtcccacaccaagggcatc
tggatgtggtgcgtccctcaccccaataagcctgaccacaccctggtgctgctggacacc
gaggggttgggggatgtggagaagggagatgagaagaacgacaactggatcttttctctt
gctgtccttctaagcagcacactggtctacaacagtacagggaccatcaacaacaacgcc
ttgcagcagctgcactatgtcactgaactgactgaacacattagagtaaagtcccataca
aggaatgaggaggacaactcggctgagtttgctcgtttcttcccttcttttgtgtggact
gtgcgagatttcaccctggagctggcgattgatgggaaagtggttacagctgatcagtat
ctggacaatgctctaaagctgaggccaggcactgacaaaaaatctcaagagtacaatttg
ccccgtgagtgcatccgaaattacttcccatcccgcaagtgctttgtgttcacgcgcccc
accacccctgagaaaatgagactgatggaggagctgagcgacactgacctagacccctgc
tttgtgcagcaggccaaggacttctgccattatgtcttcaccagtgcccagaccaaaacc
atgaaagggggctacacagtcactggcagattgctggggagcctggcggagacctatgtg
gaggccatccgcagtggccagattccctgcctcgacaacgcagtcttggctttggcagag
atccagaacaccaccgctctgaaacaagccgtctcctactacgtgaatgagatgaacgag
tgggtcgcataccccactgagactcaggaggagctgtcccagctgcatggtcagtttgag
aagaaggccgtgaagatgttcatcaaccactccttcaaagatgaagaccagaagtatcag
attgaacttatgaaatcccttcagaatgaatacgagtcattatgcatgaagaatgaagag
gcatcgcgcaaggcttgcagtgatatcatcgatgaagtattccaaatagtagaggagaac
ctgagcgccgggtcctacatggttgctggaggctataaaaagttcaagaccgacatggat
gtatatattagtatatacatggcaatgccaaataaaggcattaaggcggaagaagtcctg
aaggagtacctggcacctaaagagagcattggaagagccatactggcagcagacaaatcc
ctctctgaggcagaaaggaggattgaagaggagtgggcaaggtctgcagctgcagaacgg
gataggagggcagaggaggagaaaaaatgggtccttcagaggcagatacaggaccaagag
aggacctacagagaaaacatggagcaactgctggccaagatggaacaagacaggaaaaac
cttctgaaggagcaagacaaagttctggaggctaagctgaaggaacagagggaccttttg
gaacaaggcttcagagaccgagcagatagaatgaatgctgacatcacatctctgaagcgg
gagaaggaggagacgaaatctaaatcccagtcaattgttagcactgttgtggaaactgtt
ggtaatgtggcttccttgttcttaccaggtattgttgggaaagcagtggggataggttct
cggctcctttcacgttttttttaa
DBGET
integrated database retrieval system