Lepisosteus oculatus (spotted gar): 102696979
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Entry
102696979 CDS
T07349
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04382
Cornified envelope formation
loc04510
Focal adhesion
loc04512
ECM-receptor interaction
loc04810
Regulation of actin cytoskeleton
loc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102696979 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102696979 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102696979 (itgb4)
04810 Regulation of actin cytoskeleton
102696979 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102696979 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102696979 (itgb4)
04515 Cell adhesion molecules [BR:
loc04515
]
102696979 (itgb4)
04090 CD molecules [BR:
loc04090
]
102696979 (itgb4)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102696979 (itgb4)
Exosomal proteins of bladder cancer cells
102696979 (itgb4)
Cell adhesion molecules [BR:
loc04515
]
Integrins
Integrin beta subunits
102696979 (itgb4)
CD molecules [BR:
loc04090
]
Proteins
102696979 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
EGF_integrin
EGF_Teneurin
PSI_integrin
EGF_2
I-EGF_1
EGF_TEN
vWA_SIBA-E
Ig_TMEM131L_4
Cep192_D3
SEA
Motif
Other DBs
NCBI-GeneID:
102696979
NCBI-ProteinID:
XP_015212018
Ensembl:
ENSLOCG00000011516
UniProt:
W5N0M1
LinkDB
All DBs
Position
LG10:31051930..31100013
Genome browser
AA seq
1932 aa
AA seq
DB search
MERWVLHLSVGMVLLALLWTTTHASRVNHCLAARATTCTQCIQSGKDCSYCADEEFKQPR
CDLYNNLDAARCQMIMRAESEISVQRNMKIQTSLKQSQVAPQLMSMRLQPGEEQEVELHV
FEPLQAPLDLYILMDFSNSMSDDLDNLKKMGDSLANVVRNLSEDFTIGFGKFVDKVTEPQ
TDMRPQKLKEPWPNSDPPFSFKNVIRLTGSSETFRKELQKERISGNLDAPEGGFDAILQT
AVCKNQIGWRDNSTHLLVFSTESAFHYEADGGNVLAGILPRNDEACHLDRFGSYTHDTLQ
DYPSVPTLVRLLGKHNIIPIFAVTNYSYSYYDKLHRYFPVSEIGELKEDSSNILDLLRNA
FQNIRSKISIRAEDVPRALSTEILSQKAQITETGTFRITPGEEGIFKVRVKAQKEVEGTH
VCQLSQQEREGSLRVKPTTFNTALNINAGIVCKKCNCEETPIKKAVRCNRNGDLVCGVCT
CNPGWKGPYCNCSESSTSDASSCINPKTNRTCSDRGTCVCGVCICFNSEKNPLETYEGNF
CEFDSSQCPRFGGFLCNGLGRCFMGQCACDEGWEGSACECPKSNETCIDSKGGICNGRGT
CQCGRCICDDPETFPGATCEANFQARLGLCENKRSCVQCQAWKTGELKGKKCEGCPFKIT
MVDELKKKEEVIETCSFRDEDDDCTYEYTVDYLPNSKNLSDVQVLKKKECPPGGFLWLIP
LIMFLMLLLGLLLLCCWKYCACCKACLAMLPCCGRGRMVGFKEDQYMLRQSLLTSDHLDT
PLVRTGPPKSTDVVRWKIMDNVHRSATALTQTLNSKETIQYPLSLRLTRLFTDSLSRPDA
RETDLLRREVEENLNDVYKQIPGVQRVQKTKFRLQPNAGKRQDHTVVDTVLSAPRSAQPE
IVRLTERQVQSGRFSDLKVVPNYYTVASDRDATGLVELQEGVESVDVRVPLFVKDEDDDK
KQLRVEALEVPLGIAEIGRRFVNITIIKEQAKSIFTFLQPSYTYSRQDKVANIPVSREII
EDGHTQVTYRTRDLTAKDQRDYVFTEGELTYRPGETQKTVPVKLLELTEADSLLGEKQIK
QFVMDLSNPRQGAKLGRYPRTTVTISDDPEPSVMMFKKSTQGFTTADQLYTIPVIRTRNQ
EGPATVYWRTRKASRFEMSSPLKFSPGETEKNIVIDPCMHPGPIKPEIFQLELFDPSANA
VIGERKTTLVSVVEPSDGRPNEVQLFSQNLQSPGGRLGAPTKVTAKATSAKSIHLNWTPP
PGKPSGYKVKYWIEGDPESDAQVIDCKSPQADLTGLYPYCDYEMRVCSYNALGEGRYSDV
VQCQTLEDVPSEPGRLAFNVINPTVTQLSWAEPAETNGDITAYEVTYTPINEDSKPMGPT
KKVKIDSPKKRMLLIENLQKCQTYCYTVKARNKAGWGPTREATINLATQPPRPLSIPIIP
DIPIVDAEAGEGYDSYLMYSSDVMRSPGGSKRPSVSDEEFVNGKWDQSFLYPGGAGSLTR
NISTTSYNQSSLSPSFRSPGGTMTMETTTTYLPGQGGSLTRRHDGMVHGGLRTEEVVLRK
RSETKGYYDNDGVRDSIVMVDEPGGFSDSLGISGYSKKVVNYNISHSMRGRTQSEDVNDV
LQNLDMVLQDSRLPPGVPDTPTRLVFSALGPTALKVSWQEPHCEKEVLGYCVLYQLLNGG
DVKRIDVPNPAENSVVVKDLLPNHSYIFKVKAHSEEGWGPEREGVITIESAVDPKSPLSP
VPGSPFTLSTPSAPGPLVFTALSPESLQLSWEKPRKPNGSILGYMVTCEQLNGGGDVRTF
QVNGDTAETSLTVPNLSENVPYKFKVQARTTQGFGPEREGIITIESQDGGNFSQFNSQQV
MRRDVFNMPGEVTTRTTHTMLNDPYFSDGMMMTTQRMETSGTVTRQMTKEVVSRSMVSGT
SMTKRVENFYEA
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggagagatgggttctgcatctctctgtggggatggtcctcctcgcactgctctggacc
accactcacgccagcagagtcaatcactgcctggcagctcgggccaccacctgcactcag
tgtatccagtctgggaaggactgctcttactgtgctgatgaggaatttaaacagccaaga
tgtgatctttacaataacctggatgcagcaagatgccagatgattatgagagctgagagt
gagatatccgtccagagaaacatgaagatccagaccagtctgaagcagtcccaggtggcc
ccccagctcatgtcaatgcggctgcaacctggcgaggagcaggaggtggagctgcacgtc
ttcgagcccctgcaggcccccctggacctctacatcctcatggacttctccaactccatg
tcggatgatctggacaacctgaagaaaatgggagacagcctggctaacgtggtgaggaac
ttgtctgaagactttaccattggctttgggaagtttgtagacaaagtcacagagccccag
actgacatgagaccccaaaaactgaaggaaccttggccgaacagcgaccctcccttctct
ttcaagaatgtcattcgcctgacgggttcttccgaaacgttcaggaaagagctgcagaag
gagcgcatctctggcaatctggatgctccagagggtggctttgatgccattctgcaaact
gctgtctgcaagaaccagattggctggcgtgacaacagtacccacttgctggtcttctcc
actgagtcagccttccactacgaggcggatggtggcaatgtcttggctggcatccttccg
cggaatgatgaggcctgccaccttgatcgctttggctcctacacccacgacaccctgcag
gactacccttctgtgcccacgctggtgcgcctgctgggaaagcacaacatcatccccatc
ttcgctgtcaccaactactcatactcctactatgataagttacatcgctactttcctgtg
tcagaaattggggagctcaaggaggattccagtaatatccttgatctgttacggaatgcc
tttcagaatattcgttccaagatcagcatccgagcagaagatgtgcctagagccttgagc
acagaaatcctgtcccagaaggctcaaatcacagaaactggcaccttcaggatcacaccc
ggggaagagggcatcttcaaggtccgtgtgaaggcacagaaggaggtggagggcacccac
gtgtgtcagctttcccagcaagagagggagggcagcctgcgtgtcaaacccaccaccttc
aacactgctctcaacatcaatgcaggcatcgtgtgcaagaaatgcaactgtgaagagact
cctataaaaaaagcagtgcggtgcaacaggaatggggatctggtgtgtggagtgtgcaca
tgtaacccgggctggaagggcccgtactgtaactgctctgagagcagcacctcagacgcc
agcagctgcatcaatcccaagaccaacaggacgtgttctgaccgtgggacatgtgtgtgc
ggtgtctgcatatgcttcaactctgagaaaaaccccctggagacctacgagggcaacttc
tgcgagtttgacagctcccagtgcccacggtttggagggttcctctgcaacggccttgga
cgctgtttcatgggtcagtgtgcctgtgatgagggctgggaaggctcggcctgcgagtgt
cccaagagcaatgaaacctgcatcgacagcaaaggagggatctgtaatggcagaggaacg
tgtcagtgtggccgctgcatatgtgacgatccagagacattccctggtgctacatgtgag
gccaactttcaggcgcgccttgggctgtgtgagaacaagcggagctgcgtccagtgccag
gcctggaaaaccggcgagctgaagggaaagaagtgcgaaggctgtcccttcaagatcacc
atggtggacgagctgaagaaaaaagaggaagtgattgagacctgcagtttccgggatgag
gatgatgactgtacctatgaatacactgtggactatctccccaactcaaaaaacctcagc
gatgtccaggtgctgaagaaaaaagagtgtccccctggaggcttcctctggctcatcccc
ctcatcatgttcctcatgctgctcctgggtctgctgctcctctgctgctggaagtactgt
gcctgctgcaaggcatgcctggctatgcttccatgctgtgggcgaggacgcatggtgggc
ttcaaagaagaccaatacatgttgcgacagagtctcctaacctctgaccacctggacacc
ccactggtgcggactggaccccccaagagcactgatgtggtgcgctggaaaatcatggat
aatgtgcaccgcagtgccactgcgctcacacagaccctcaactccaaagagaccatccag
tatcctctgtccctgcgcctgactcgtctcttcacagacagcctgtctaggcctgacgcc
agagagacggacctgttgcgtagggaggtggaggagaatcttaatgatgtctacaagcag
attcctggagtacagagggtccaaaagacaaaattcagactccaaccaaatgctggtaaa
aggcaggaccacactgttgtggatacagtgctttctgcaccacggtctgcccagcctgaa
atcgtcaggctcacggagagacaggtgcagtctggcaggttcagcgacttgaaggtggtg
cccaattactacaccgtggcttcggacagagacgcaacaggattggtggaactgcaggaa
ggggtggagtcagtggatgtgcgtgtgccgctctttgtcaaggatgaggacgatgacaag
aaacagctgagggtggaggcgctagaggtgccattgggaattgctgagattggacgccga
tttgtcaacatcaccatcatcaaggaacaggccaagagcatcttcaccttcctgcagcca
tcctacacctacagtcgtcaggacaaggtggccaacatccctgtgagccgtgagatcatt
gaggacgggcacacccaggtcacctaccgcacccgggacctcaccgccaaggaccagcgg
gattatgtattcacggaaggcgagctgacctaccggcctggagagactcaaaagactgtg
ccagtgaagctgctggagctgacagaggcagactccctcctgggcgagaagcagatcaag
cagtttgtcatggacctcagcaacccccggcagggcgccaaactgggacgctacccacgt
accactgtcactatctccgatgatcccgagcccagtgtgatgatgttcaagaagagcacc
cagggcttcacgacagctgaccaactctacactatccctgtgattcgaacccgcaaccaa
gagggccctgccacggtgtactggcggacccgcaaggcttcacgctttgaaatgtccagc
cccttaaagtttagccctggagaaacagagaagaacattgtgattgacccgtgtatgcac
cccgggcccattaaacccgagatcttccagctagagctgtttgaccccagcgccaatgcg
gtcatcggggagaggaagaccactcttgtgtccgtcgtggagccgagtgatggtaggccc
aatgaggttcagcttttctctcagaatctccagtctccaggaggacgccttggtgccccc
accaaagttactgccaaggccactagtgccaagagtatccatctgaactggacccctcct
cctggcaaacccagcggctacaaggtgaagtactggatcgagggtgacccagagtctgat
gcccaggtcattgattgcaagagcccgcaggcagatctgaccggcctgtacccctactgc
gactatgagatgcgagtgtgtagctacaacgctctgggcgaggggcgttactctgatgtg
gtgcagtgccagacactggaggacgtgccgagtgagccaggtcgcctggccttcaatgtc
atcaacccgactgtcacccagctcagctgggcagagcctgctgagaccaatggtgacatc
actgcctatgaggtcacctacacgcccatcaacgaggacagcaagcccatgggccccaca
aagaaggtgaagatcgacagccccaagaagcgcatgttacttatcgagaacctgcagaag
tgccagacctactgctacactgtcaaggcccgcaacaaggctggctggggccccaccagg
gaggccaccattaacctggccacgcagccccccagacccctgtccatcccaatcatccca
gacatcccaattgtcgacgctgaagcgggtgaaggttatgacagctatctgatgtacagc
tctgacgtcatgcgctctcccgggggaagcaagcgccccagcgtgtccgacgaagagttt
gtcaatgggaagtgggatcagagcttcctctatcctggaggagcgggctctctgacacgc
aacatcagcaccaccagctacaatcagagctccctgagccccagtttccgcagtccgggc
ggcactatgaccatggagaccacaaccacctacctgcccggtcaagggggttcgctcacg
cgcagacatgacgggatggtccatggagggctccgcacagaggaggtggtcctcaggaag
cggtccgagacgaagggttactatgacaacgatggtgtgcgagactctattgtcatggtg
gatgagcctggcggattctcagacagtctaggcatttctgggtacagcaagaaggtggtg
aactacaacatctctcacagcatgagaggtcggactcagtctgaagatgtcaatgatgtc
ctgcagaatctggacatggtgctgcaagactctaggctgccccctggtgttcctgacacg
cccacacgcctggtgttctcagctctgggccccactgccctgaaggtgagctggcaggag
ccgcattgcgaaaaggaagtgctgggctactgcgtgctgtaccagctgcttaatggaggt
gacgtgaagaggatcgacgtgcctaacccggcagagaactcagtggtggtgaaagacttg
ctgcccaaccactcatacatcttcaaagtgaaggcccatagtgaggagggctggggaccc
gagagggagggtgtcatcaccattgagtctgcggtcgaccccaagagtccattaagtcct
gtaccaggctcccccttcacgttaagcaccccaagtgccccaggccccctggttttcaca
gcactcagccccgagtctctgcagctgagctgggagaagccacgcaagcccaatggaagc
atccttggctacatggtgacctgcgaacaactgaatggagggggagacgttcggactttc
caggtgaacggtgacactgctgagaccagtctgacggtgcccaacctcagtgagaacgtg
ccctacaagttcaaagtgcaggccaggaccacgcagggctttggtcctgaaagagagggc
atcatcaccatcgaatcgcaggatggaggtaacttctctcagttcaacagccagcaggta
atgaggagagatgtcttcaacatgcctggggaagtcaccaccaggaccacccacacaatg
ctcaatgacccctacttctcagacggcatgatgatgaccacgcagcgcatggagaccagt
ggcacagtgaccagacagatgaccaaagaggtggtgagcaggagcatggtctctgggaca
agcatgaccaagagagtggagaacttctatgaggcttga
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integrated database retrieval system
