KEGG   Lepisosteus oculatus (spotted gar): 102697039
Entry
102697039         CDS       T07349                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03420  Nucleotide excision repair
loc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102697039 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102697039 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:loc04121]
    102697039 (cul4b)
   03400 DNA repair and recombination proteins [BR:loc03400]
    102697039 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:loc04147]
    102697039 (cul4b)
Ubiquitin system [BR:loc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     102697039 (cul4b)
DNA repair and recombination proteins [BR:loc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      102697039 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      102697039 (cul4b)
Exosome [BR:loc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102697039 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 102697039
NCBI-ProteinID: XP_006632966
Ensembl: ENSLOCG00000015253
LinkDB
Position
LG7:complement(47357806..47375619)
AA seq 866 aa
MLAMKDGSTSGLSTPNPPPPAQEVRPAASDGNNGSSNNSTSKKRKINSSEKEDFDSLSSS
PPKNISASCSSGSPTSHHIQKKLRFEDSVDFIGLNVKMAEESSSSSASSSNKAKNAFLAA
GVGHHANGLTKTSTGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKGAVEAI
QNSTSIKYNLEELYQAVENLCSHKISANLYKQLRVVCEDHIKAQIHQFREDALDSVLFLK
KIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRSYIISDQKVQNKTI
DGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQE
REVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDE
NRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVD
HIIDICFLKNEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKML
DKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEG
MFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEI
FKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDI
KQATGIEDSELRRTLQSLACGKARVLTKTPKSKDVEDGDKFTCNDDFRHKLFRIKINQIQ
MKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLK
KRIESLIDRDYMERDKENPNQYNYVA
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgcttgcgatgaaagacggaagtacttccggtttatctacccctaatcccccaccgcca
gctcaggaggttagaccagcagcttctgatggtaataacggtagcagcaataattcaacg
tccaaaaagagaaaaataaacagctccgaaaaggaagactttgattccctgtcttcgtct
cctcccaaaaacatcagtgcgtcctgctcctccgggtctcccacctctcaccacatacaa
aagaaactgaggttcgaggactccgtggatttcattgggctgaatgtgaaaatggctgag
gagtcatcttcatcatctgcatcgtccagtaacaaggcaaaaaacgcctttctggccgcc
ggggtcggacaccacgctaacggactgaccaaaacctcgaccggttccgccaccttctcc
aacagtaaacccggagctgccaagaaactagtgatcaagaacttcaaagaaaagcccaaa
ttgccagaaaactataccaacgaaacctggcagaaactgaagggggcagtggaggccatt
cagaacagcacttcaatcaagtataacctagaggagctctaccaggctgttgaaaatctc
tgctcccataaaatttctgcaaatctttataagcagttgagggtagtgtgtgaagaccac
attaaggcacagatccatcagttcagagaggatgctctggacagcgtcctcttcctaaag
aagatcgataagtgctggcaggatcactgcagacaaatgatcatgattagaagtatattc
ctatttctggatcgaacatatgttttacaaaattcaatgctgccatccatctgggatatg
ggtctggagctgttcaggtcctacataattagtgatcagaaggtccagaacaagacgatc
gatggcatcctgctgttgattgagagagagcgaaatggggaggccatcgaccggagtttg
cttcggagcctcctgagcatgctgtcggatttgcagatttatcaagactcatttgagcag
cggtttttggaagagactaaccgcctgtatgctgctgaaggacagagactgatgcaagaa
agagaggtccccgagtaccttcaccatgtaaataagcgtttagaagaggaggcggacaga
gttatcacgtatttagaccagagcacacaaaaaccccttatagccactgtggaaaagcag
ctactaggtgaacatctaacagccacccttcagaaaggcctgaaccacctcctggacgag
aatcggatccaggacctgtcgctgctctaccagctcttcagccgggtgcgcggaggcgtg
caggtcctgctgcagcactggatcgagtacatcaaggccttcggaagcacaatcgtcatc
aaccccgagaaggacaagacgatggtccaggagctgttggatttcaaagacaaggtggat
cacatcatcgacatctgcttcctgaagaatgagaagtttgtcaacgccatgaaggaagca
tttgaaacctttatcaataagaggcccaacaaaccagctgagcttatcgctaaatatgtg
gattcgaagctccgagcgggaaacaaggaggctacagacgaggaattggaaaaaatgttg
gacaaaataatgatcatcttcaggttcatttatggcaaagacgtatttgaggccttctac
aagaaggacctagcgaagcgcttgctggtggggaagagtgcttctgtggacgcggagaag
tccatgctgtccaagctcaaacacgagtgcggcgctgccttcaccagtaaactggaaggg
atgttcaaggacatggaactttcgaaggacatcatggtgcagttcaagcagtatatgcaa
tgtcaaaacatacctggtaacattgaactgacagtgaatattttaacaatgggctattgg
ccaacctacgtgcctatggaagttcacctgcccccagagatggtcaaactgcaggagatc
tttaagacattttaccttgggaagcacagcgggaggaaacttcagtggcagtccacatta
ggacactgtgtactaaaagctgaatttaaggagggtaaaaaagagctgcaggtttcactg
ttccagacgttggtgttacttatgttcaacgaaggagaggagttcagtttggaagatatt
aagcaggcaactggaatagaggacagcgagctgcggcggacactgcagtccctggcctgc
ggcaaggccagagtcctcaccaagacccccaagagcaaggacgtggaggacggagacaag
ttcacctgcaacgacgacttcaggcacaagctcttccggataaagatcaaccagatccag
atgaaagagacggtggaggaacaagccagcactacagagagagtattccaggaccggcag
taccagatcgatgctgctatcgtcaggataatgaagatgaggaagaccctgagccacaac
ctactggtgtcagaggtgtataaccagctcaaattcccagtcaagccggctgacttgaag
aagagaatagagtcgctaattgacagggactatatggaacgtgacaaggagaaccccaac
cagtacaactacgtggcgtag

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