Lepisosteus oculatus (spotted gar): 102697248
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Entry
102697248 CDS
T07349
Symbol
ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102697248 (ccdc50)
Membrane trafficking [BR:
loc04131
]
Autophagy
Other autophagy associated proteins
Others
102697248 (ccdc50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
102697248
NCBI-ProteinID:
XP_015216741
Ensembl:
ENSLOCG00000005056
LinkDB
All DBs
Position
LG14:9102444..9138178
Genome browser
AA seq
493 aa
AA seq
DB search
MADFTSIDQNKLPGVKEVCRDFAVLEDHALAHNLQEQEIESHLASNIHKSRLVQQDLQVA
KKLQEEEDLRAKVRIQRKHRDIERSDNEIAQEIQEQLVKQAEQQRQQEEKDEAIARKLQE
KEMKEERRRMKQLQEAPYEESYYDEKGEQSRGRHPERLLPDSRKERGHYSHDRDRRHRPE
SRGSQSTFYADGDVAHRRDELQRSPPRRAQEPRQESPDSERVVRRKERPPRPPSPQFNRV
RHREHSREHGRGRNSQEDHYLGPNRTRSAEESVDDDDWVDRQGQQPQLDEVFEEHKPLSH
RREERREHVDQTEEAHRTHSHSREDRHHRHHPKDPGRKARGDYGMREVTQGVARMDLREQ
ELRDLEVARRLQEEELKASQLEKRAAQVAQDEEIARLIMEEEKKVYKRSKEREKGYTERR
RHEAEWKLEPEEVVRPRSREECEYQRPRQHKPARPPPPVNDYENVDSTYAYPRSSCSPRP
EAAYKVLKKEPEA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttactagtattgatcagaataaactacccggagtgaaggaagtgtgccgg
gactttgcagtgctggaggatcatgccctcgctcacaatctacaggaacaggaaattgag
agccatctggcctccaacattcacaagagccgtctggtgcagcaggacttgcaagtggct
aagaagctgcaggaggaggaggacctgagggccaaagttcgcatccagagaaaacacagg
gacatcgagcgaagtgataatgagatcgctcaagagatccaggagcagctcgtgaagcag
gcagagcagcagagacaacaagaagagaaagatgaggccattgctcgcaaattgcaggag
aaagagatgaaggaagagaggaggaggatgaaacagcttcaggaggcaccctacgaagag
agctactatgatgagaaaggagagcagagccgtggcagacatccagagcgtctgcttccc
gacagcaggaaagagcgaggacattacagtcacgacagggaccgcaggcacaggcctgag
tctcgcggctcacagtccaccttctatgcggacggtgatgtggcacacaggagggacgag
ctgcagcgttcgcctcctcgcagggctcaggagcccaggcaggagtctcccgactccgag
agggtcgtgcgcaggaaagagaggcctccaagacccccctctccccagttcaacagggtg
cgccacagggaacacagcagagaacacggaagaggcagaaacagccaggaagaccattat
ctggggcctaacaggaccaggtccgcagaggagagtgttgatgacgatgactgggtggac
aggcaggggcagcaaccgcaactcgatgaggtgtttgaagagcacaagcccctgtctcac
aggagggaggagagacgagagcacgtggaccagactgaagaggcgcatagaacgcactct
cattcacgcgaagacagacatcaccgccaccaccccaaagacccaggtaggaaagcacga
ggggactacggcatgagagaggtgactcagggtgttgctcgcatggacctccgggagcag
gagctcagggatctggaagtggccaggagactacaagaggaggagctgaaggcaagccag
ctggaaaagagggcagctcaagtggcgcaggatgaggaaattgcccggttaataatggag
gaggagaagaaggtgtacaagaggtcaaaagaaagagaaaaaggatacacagaaaggaga
cgacatgaagcagaatggaagctggagcctgaggaagtcgttcggcctcgatcacgcgag
gagtgcgaataccagcgaccgcgacagcacaagccagcccgtcctcctcctcctgtgaat
gactatgagaatgtggattccacctatgcgtatccacgctcctcctgctctcccaggcct
gaagctgcgtacaaagtgctgaagaaggaaccagaagcctaa
DBGET
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