Lepisosteus oculatus (spotted gar): 102697300
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Entry
102697300 CDS
T07349
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X2
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102697300 (zc3h12b)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102697300 (zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_4
UBA_N4BP1_C
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
102697300
NCBI-ProteinID:
XP_006632880
Ensembl:
ENSLOCG00000014631
UniProt:
W5NBK0
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All DBs
Position
LG7:40222490..40255593
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AA seq
947 aa
AA seq
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MVLELAAPASAGPLLQRSIPYIERVFRVSVRHSTAESNCGSAGESSCSIRLSIGEGEEGD
CTKAKDYIVSLISPKHRRKEPLTLALRKRLLSVKSIIEYDSQAVVEVKENTVEISGGGHN
VMTAWSMVEKLKMEKRSSREDANVLREATDGSGESEDGTSSESEAEQVCSKKRESLISTK
PHRQLCRSPCLDRPSFSQSSILQEVRPEDSKVAGCKFSSEYQSKMDFALKLGYSREQIET
VLNKLGANALINDILAELVRLGNKGDLDAQASGSTSTLVPRGPCTKEISSPEVSLEDEVM
DNLDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQSRP
DAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSDGIIVSNDNYRDL
QNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCPYG
KKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAKCGTGPAAAKGESS
TEAKRITPKRQSDPSIRSVACEPEERLSAARKSEANSVPSLVSALSVPTMQPVKSHAAGA
LNTRSASSPVPGSSQFSHSSLEHMSSVQYPPILVTNSHGTSVNYTEQYGKYDSVGDHGYY
SMLSDFSNMSLNSMHNTDNFYSMEHEHGMYQRNPSPCSDPCNESYSSYTDLYMSSLDSGP
EENVKSHLSSSQNRLQAFAHGFHEALTRVQSYGPDEPKQAPRKQSVSHLAPHVQHPVVGA
RSSCPGDYPIPQNVHPSSTSQPGRALGMTRMDSISDSRLYESNPMRQRRPPLCREQHASW
DPLPCGTESYGYHSYPLSNNLMQPCCERVMVRSMPEKMEQIWRSPWESMSPEPQERHIIP
EHQYQTYRNLCNIFPAYIVHSVMEKNPHMTDPQQLATVIVAKLKSGR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggttctggagctggcagcgcccgcgagtgcaggcccattgctgcagcgctctatcccg
tacatcgagcgagttttccgggtgagtgtcaggcacagcaccgctgagtcaaactgcggc
agcgccggcgaaagcagctgcagcatcaggctgagtatcggggagggcgaggaaggtgac
tgcacgaaggcaaaagattatatagtgtctctgatttcaccgaaacacagaaggaaggag
cctttaactttggcactgcgcaaacggctgctgtcagtgaaatcgatcattgaatatgac
tcacaggctgttgtggaggtgaaagagaacactgtagagatttcgggtggggggcacaac
gtaatgacggcctggtccatggtggagaagctgaaaatggagaaaaggtcctccagagaa
gatgccaatgtcctcagagaggcaacagatggcagtggggagtctgaggatggcactagc
tcagagagtgaagcggagcaggtctgcagcaaaaagagggaatcactgatctccaccaag
ccccacagacaactctgccgctccccttgcctggaccggcccagcttttcccagagcagc
atcttgcaagaggtccgaccagaagacagcaaggttgctggctgcaagttcagctctgaa
taccagtccaaaatggattttgcattgaagctgggatactcacgtgaacaaatagaaact
gtactcaacaagctaggagcaaatgctcttattaatgacattttggcagaacttgtaaga
ctaggcaataaaggtgacttggatgcacaagctagtggatccacaagcacattggtacct
cggggcccttgtactaaggaaatctcaagtcctgaagtttcattagaagatgaagtaatg
gacaatttagataacctgagacctatagttatagatggctccaatgtggctatgagtcat
ggaaacaaagaggttttctcctgccgtggaatccagttggctgtggactggtttcttgag
aaaggacacaaagacattacagtatttgtgcctgcttggaggaaagagcagtccaggcct
gatgcccccatcacagatcaggagatcctgagaaagcttgaaaaagagaaaattcttgtc
ttcactccgtctcggagagtccaaggaagaagggtagtgtgctacgatgatcgctttata
gtgaagcttgcatatgactctgacggcattattgtatcaaatgacaactacagggatcta
cagaatgagaaacctgaatggaagaaattcatagaggaacggctgctgatgtattcattt
gtaaatgataaattcatgccccctgatgatcccttggggagacatggtccaagtttggag
aatttcctcagaaaacggcctgttattccagagcataaaaagcaaccttgtccttatgga
aagaaatgtacctatggacacaaatgcaaatactatcaccctgaacgtgcaaaccagcca
cagagatcagtagcagacgaactgcgtgctttcgctaagctttcagctgtaaaaacaatg
agcgaaggggccttagccaaatgtggcacagggcctgcagcagcaaaaggagagagcagc
actgaggcaaaacgcatcactcccaaacgtcagtctgaccccagcatccgctctgtggcc
tgtgagcctgaagagcgactgtcagctgcccgcaagtctgaggcaaactctgtgccttct
cttgtgtctgctctcagtgtcccaaccatgcagcctgtgaaaagccatgcggctggtgcc
ttgaacacccgatcggccagcagtcctgttccaggctcttcccagttctcccacagttca
ctggagcacatgtccagcgtgcagtacccacctattttggtgaccaacagccatggcacc
tctgtcaactacactgaacagtatggcaaatacgattctgtgggtgatcacgggtattat
tctatgttgagcgacttttcaaacatgagcttgaacagcatgcacaacacagacaacttc
tatagcatggagcatgaacatgggatgtaccagagaaatcccagcccttgctctgatccg
tgcaatgaatcctattcctcctacactgatttgtacatgagctccttagacagcggtcct
gaagaaaatgtgaagagtcacctgtcgtcctctcagaacagactgcaggcatttgcccat
ggattccatgaagcgttaacaagagtgcagagttacgggcctgatgagccaaagcaggca
cctcgtaagcaatctgtgtcccatcttgcgccacatgtacagcatccagtggtaggtgcc
aggtcaagctgccctggggattaccctatacctcaaaatgttcacccttcatccacttca
cagccaggtcgggcactgggcatgaccagaatggacagcatttcggactccagactctat
gaaagtaatccgatgagacaaaggaggcctccactttgcagggagcagcatgccagctgg
gacccacttccctgtggaactgaatcctatggataccactcttaccccttaagcaacaat
ctcatgcagccctgttgcgagcgagtcatggtacggagcatgccggaaaagatggagcag
atctggaggtcgccttgggaaagcatgtctccggagcctcaggaacgtcacatcatccca
gagcaccaataccaaacctaccgcaacctctgcaacattttcccagcctatattgttcac
tccgtaatggagaagaatccccacatgacagatccacagcagcttgcaacggtaatagtt
gccaagttaaagtcagggcgttaa
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