Lepisosteus oculatus (spotted gar): 102697418
Help
Entry
102697418 CDS
T07349
Symbol
pds5a
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102697418 (pds5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102697418 (pds5a)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102697418 (pds5a)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
102697418 (pds5a)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
102697418 (pds5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
EnP1_C
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
102697418
NCBI-ProteinID:
XP_015200905
Ensembl:
ENSLOCG00000012981
LinkDB
All DBs
Position
LG4:62798455..62832160
Genome browser
AA seq
1151 aa
AA seq
DB search
MEFPQQPRPADGKITYPPGVKEITDKITNDEVVKRLKMVVKTFMDMDQDSEDEKQQYLPL
ALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLED
TKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLD
LMSSIIMEGDGVTQELLDSILINLIPAHKVGLLLVEKIFAQYMVPHNLETEEKMKCLYYL
YASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANSSAMFGKLMTIAKNLPDPG
KAQDFMKKFNQVLGEDEKLRAQLELLISPTCSCKQAEVCVREISRKLTYPKQPTNPFLEM
VKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEEEGVTPDTAIRSGLELLKVLSFTH
PTSFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGHKIETELQHIRSTLIPVLHQKAKR
GTPHQAKHAVHCIHAIFHNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQ
FASPMKSIVANFIVKDLLMNDRSIGNKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMK
NNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGGAIMKLAQEPCYHEIIT
PEQFQLCGLVINDECYQVRQIFAQKLHMALVKLQLPLEYMAVFALCAKDPVKERRAHARQ
CLLKNISIRREYIKQNPMANEKLVSLLPEYVVPYMIHLLAHDPDFTKPQDFEQLRDIKEC
LWFMLEVLMTKNENNSHAFLRKMVENIKQTKDAQAPDDPKTNEKLYVVCDIALFVIVNKS
TACHLDSPKDPVLPTKFFTPPDKDFVNDKDYLSLEARTVLLTGKPKPAGVLGTVNKPLSV
AGKRPYTRTGGSETGSNVSGNSEPSSPAGNKGREPGAEASETGACENEENPVILISVTPG
KAEPVKKETNSEQAAPGNASAERGKKRAAPPADGAENMHQSAEGRASDEAGAPAVPKPRR
GRPPKTQPAGGGGGGAEKGAEAKSGGRGRKRTAASQDSPGVVEPITIKIPKQQKDAEVKR
AAPQRQMDLQSSEVLGSDGNSLWDVESSPDSLGKERNVFRSKSSLEELEKADRRQGAPLK
VKRKGFRRQKS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccgcagcagcccagacccgcagacggcaagatcacctacccgcccggggtg
aaagagatcaccgacaagatcaccaacgatgaggtcgtcaagcggttaaagatggtggtg
aaaacgtttatggacatggaccaggactcggaggacgagaagcagcagtaccttcccctg
gccctgcacctggcctccgagttcttcctcaggaaccccaacaaggacgtgcgcctcctg
gtggcctgctgtctggctgacatcttcaggatctacgctcctgaggcgccctacacctcc
cacgacaagctcaaggacattttcttattcatcacacggcagctgaaggggctggaggac
accaagagcccacagttcaacagatacttctacctgttagagaacttagcttgggtgaag
tcttacaacatatgctttgagctggaggattgcaacgagattttcattcagctgtttaag
actctcttctctgtcatcaacaacagccacaaccagaaggtgcagatgcacatgttggat
ttgatgagttctatcatcatggagggtgatggggtgactcaggaactactggattccatt
ctcatcaatctcattcccgcacacaaggtcggtctgttgctggttgaaaagatcttcgcc
cagtacatggtcccccacaacctggagacggaggagaagatgaagtgtctgtactacctg
tacgccagcctggaccccaacgcagtcaaggcactgaatgaaatgtggaaatgccaaaac
atgctgaggagtcacgttcgggagcttctggacctacataagcagccgacctcggaagca
aacagttctgccatgtttgggaagctgatgacaatagcaaagaacctgccggacccaggg
aaggcccaggacttcatgaagaagtttaaccaggtgctgggggaggacgagaagctgagg
gcccagctggagctgctgatcagccccacctgttcctgcaagcaggcggaagtgtgtgtg
agagaaatatcccgtaaattgacgtaccctaagcaaccgaccaacccgttcctagaaatg
gtgaagttcctcttggaaagaatcgcacctgtccacatcgactcagaggccatcagtgct
ctggtgaagctgctgaataaatcgatagagggtactgcggatgacgaggaagagggcgtt
actcctgacactgctattcggtctggactggagctgctcaaggttctgtctttcactcat
cccacctccttccactcggcggagacatacgagtccctcctgcagtgcctgaaaatggaa
gatgacaaggtggctgaggcagctatccagatcttcaggaacacgggacacaagatcgag
acggaactgcagcatattcgatcaaccctgattcctgtcctgcaccagaaggccaagaga
ggcactccacaccaggccaagcacgcggtgcactgcatacacgccatcttccacaacaag
gaggtgcagctggctcagatctttgagcctctgagccggagcctcaatgccgatgtgcct
gaacagctgatcactcctctcgtctctctgggacatatctccatgctggcccccgaccag
tttgcctcacccatgaagtccatcgtggccaacttcatcgtcaaggatctgctgatgaat
gatcggtccataggtaacaagaatgggaagctgtggtctccagatgaagaggtttcccca
gaggtgcttgcaaaggtgcaagctatcaagttgctggtgcgctggttactgggcatgaaa
aataaccagtcaaagtcggccaactccacgctgaggctgctgtcggcgatgctggttagc
gagggggacctgacagagcagaagaagatcagtaagtcagacatgtcccgtctgcgcctg
gcagctgggggtgccatcatgaagctggcacaggagccctgctaccacgagatcatcacc
ccagaacagttccagctctgcggcctggtcatcaatgatgagtgttaccaggtgaggcag
atatttgcacagaagctgcacatggcgctggtgaagctgcagctccccctggagtacatg
gctgtgttcgccctgtgcgccaaagaccccgtgaaagaacggcgagcccacgctcggcag
tgtctgctgaagaacatcagcatccgcagggagtacatcaagcagaaccccatggctaac
gaaaagctggtgtctctcctgccagaatacgttgtcccctacatgatccacctcctggcc
catgatccagacttcaccaaacctcaggactttgagcagctgcgcgacatcaaagagtgc
ctgtggttcatgctggaagttttaatgaccaagaatgaaaacaacagccacgccttcctg
aggaagatggtggagaacataaagcagaccaaggacgcccaggcgccggacgaccccaaa
accaacgagaagctctatgttgtctgtgatatcgcactgtttgtcatcgttaacaaaagc
acagcttgccatttggattcgccgaaagatcccgtattacctacaaaatttttcacccca
ccagataaagactttgtcaatgacaaggattatctgtcattagaagccaggacggtcctt
ttaacaggaaagcccaagccggctggcgtcctcggcaccgtgaacaagccgctgtccgtg
gccgggaagaggccgtacaccaggacgggcggctcagaaacgggcagcaacgtcagcggg
aactcggagcccagctccccagccggaaacaagggaagggagcccggcgcagaggcgtcc
gagacaggagcctgcgagaacgaggagaacccggtgatcctgatctcggtcacacccgga
aaagctgaacccgtgaaaaaggagaccaactcggagcaggcggcgcccggcaacgccagc
gcggagcgaggcaagaagcgcgccgccccccccgccgacggggcggagaacatgcaccag
agcgccgaggggagagcctcggacgaggccggggcccccgccgtccccaaaccccggcgg
gggcgccccccgaagacgcagcccgccggcggcggcggcggcggcgcggagaagggcgcg
gaggccaagagcggcggccggggccggaagagaacggcggcgtcccaggacagcccaggg
gtggtggagcccatcaccatcaaaataccaaaacagcagaaagacgccgaggtcaagagg
gcggcgccacagagacagatggatttgcaaagcagcgaggttctggggagcgatggcaat
tccctgtgggacgtagagtccagtccagacagcctggggaaggagaggaatgtgtttagg
agcaagagcagcttggaggagcttgagaaagcagacagacgccagggagccccacttaag
gtaaaaagaaaaggtttccgaagacaaaaaagttga
DBGET
integrated database retrieval system
