Lepisosteus oculatus (spotted gar): 102697487
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Entry
102697487 CDS
T07349
Symbol
cdhr1
Name
(RefSeq) cadherin-related family member 1 isoform X2
KO
K16501
cadherin-related family member 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
loc04515
]
102697487 (cdhr1)
Cell adhesion molecules [BR:
loc04515
]
Cadherins
Cadherin related
102697487 (cdhr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RibLong
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102697487
NCBI-ProteinID:
XP_006630419
Ensembl:
ENSLOCG00000005567
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Position
LG5:7937691..7960158
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AA seq
863 aa
AA seq
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MRSVKKTYISLFLTLVHVCLVQADYAPYFFDNGPSSDTGNMALFSLSEDTPVGTQIYILN
GTDPEQDLVTFGLAFEAGSKEYFKVDPKSGNVTLIEELDREKEDEIEVLVSISDGLNKVV
EKVRVLVTDANDESPEFGNMSFIVNVPEDTPSGGSIFKVQAVDKDTGSGGSVTYYLQNSR
MTKFAIDRHSGVLRIKPGEALDYEKSRTHFITVVAKDGGGKYKGKYQVLSSSATVTINVI
DVQDTPPSFVGTPYYAYVYEDTVLGSEIFTVVAHDGDRGNPNAIHYSIINGSDGFFAINN
TSGSISLLDYPVHLKKEVYELRIQASEVSEEGNVVAHVTSTVTIRVVDLNNHPPTFYGEN
GPQSTFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLVGPGRVLRVVPQTVLNEA
QVTIIVENSAAIDYEKYQSLTFKLLAVEIDTPEKFSSTADIVIHLLDTNDNIPKFSSDYY
IARIPENSPGGSNVVSVTATDPDSGLWGEVKYSIYGTGSDLFLIHPTTGIIYTQPWATLD
AEEKSKYNFYVKAEDTEGKYSLAEVFVTILDMNDHPPEFNENFLEKTMVIGAPVKIEAID
DDAEEPNNVIEYSITQGDPDNIFDINTETGEIKLKSYIKSMDIVQNITKQRDCKWSVVVQ
AKDRGSPSFSTTAVVKIDITEATQLKGPMAAFLMQSRDNPMKALGVLAGVICVMVIVTVL
ISTAMFLRNKTSNRITPARRIIKKRPKKHPLRTLHRGWFPFGRRGNSSERFTVEDPGSGD
ENLNSNNNIKMPPPPPSAPALPPPPQYIPRPDKKVWTVPTVSGSLVSTSAKTPVSNKDVS
SALVSELKMKLEKKMIENSATRY
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgtaaagaagacatacatttcactctttctcaccttggtgcatgtttgtcta
gtacaagcggactatgctccttatttttttgacaatggacccagcagtgacacgggcaac
atggctttattcagcctttctgaggacacgcccgttgggacccaaatatatattctcaat
gggacagatccagaacaggacctggtaacatttggtttggcttttgaagcaggatcaaaa
gagtactttaaagtggatccgaaatctggaaatgtaactctgattgaagaacttgacaga
gaaaaagaagatgaaattgaagttcttgttagtatttctgatggccttaataaagtggtt
gaaaaggtgcgggtgttggtaaccgatgccaatgatgaaagcccagagtttggaaacatg
tcttttattgtaaatgtcccagaggacacaccctcaggtggcagtatttttaaagtacag
gctgtggataaagacactggttcaggtggcagtgtcacctattaccttcagaactcccgg
atgaccaagtttgccatagacaggcacagcggggtccttcgcattaaacctggagaagct
cttgattacgagaagtcaaggacacatttcatcacggttgtagcaaaggatggtggcgga
aaatacaagggaaaataccaggtgctgtcatcttcagccacagtgaccatcaatgtgata
gatgttcaggacacccctccttcctttgttggcacgccctattatgcatatgtttatgaa
gacaccgtactgggatctgaaatatttactgttgttgcccatgatggagacagagggaac
cctaatgctatccattattccatcataaatggaagtgatggtttttttgccataaacaat
acaagtggatcaatcagtcttcttgactatcctgtccatcttaaaaaggaggtgtatgaa
cttagaatccaggcctcagaagtaagtgaagagggcaatgtggtggcccacgtgacttcg
actgtgacaatccgagttgtggacctcaacaaccatcctcctacattctatggcgaaaat
ggacctcagagtacattcgaactgacaatgtacgaacaccctccagagggcgagattctg
cgaggattgaagataacagtcaatgactccgatcagggagccaatgcaaagttcaacctg
aggctggtgggcccgggtcgcgtgctcagagtggtccctcagacggtgctgaatgaagca
caggtgaccatcattgtggaaaactctgctgcaatagactatgaaaagtaccagtcctta
acattcaagctccttgctgttgaaatcgacacacctgagaaattcagctcaactgctgac
attgtgattcatctcctggatactaatgataatattcccaaattctcttcggactactac
atcgccagaatcccagaaaactcccctggaggctccaacgtggtctctgtaacggcaaca
gatccagattctggtctttggggtgaggtcaagtactctatctatggaacgggctcagat
ttgttcctcattcatcccacgacgggaatcatctacactcagccatgggctactctcgac
gcagaggagaaatcaaagtacaacttctatgtgaaggcggaggacactgagggcaagtac
agcctggctgaggtcttcgttaccatcctggatatgaatgaccacccccccgaattcaac
gaaaactttcttgaaaagactatggtcatcggtgcacccgtgaaaatagaggcaatagac
gatgatgcggaggagcccaataatgtgattgagtattccatcacgcaaggagatccagat
aatatttttgacataaacacagagactggggagatcaagcttaagtcttacattaagtca
atggacatagtgcagaacatcacgaagcagagggactgcaaatggtcagtggtggtccag
gctaaagacagaggctccccttctttcagcaccactgcagtggtgaaaatcgacatcact
gaagcgactcaactcaaggggcctatggcggcctttttaatgcaaagtagggacaaccca
atgaaagccctaggtgtgctcgctggtgtcatttgcgttatggtaatcgtaacggtcttg
atctccacggctatgttcttgcgcaacaaaacgtccaacaggatcacgccggcccgccgc
atcatcaagaagaggcccaaaaagcatccgctgcggactctgcaccgtggctggttcccg
ttcggtcgccgtggcaactcctctgagaggttcaccgttgaggacccaggaagtggcgac
gagaatctgaatagcaacaacaacatcaagatgccgccaccgcctcccagcgcccctgct
ttgcccccacccccccagtacattcccaggcccgacaagaaagtgtggactgtgccaacg
gtgtccggatcactggtgtccacatctgccaaaacacccgtcagtaacaaagatgtcagc
tcggcactggtgtctgagctaaagatgaagctggagaaaaagatgatagagaacagtgca
acccgctattga
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