Lepisosteus oculatus (spotted gar): 102697518
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Entry
102697518 CDS
T07349
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
loc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102697518 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
102697518 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102697518 (lsm7)
03041 Spliceosome [BR:
loc03041
]
102697518 (lsm7)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102697518 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
102697518 (lsm7)
Spliceosome [BR:
loc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102697518 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
102697518
NCBI-ProteinID:
XP_006640075
Ensembl:
ENSLOCG00000004356
LinkDB
All DBs
Position
LG19:6228090..6231185
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagagaagaagaagaaggagagcatatttgatttgtcaaagtacatcgac
aagaccatccgtgtgaagttccagggtggacgagaagccagtggcatcctgaaagggttc
gatccgctcttgaacctggtattggacggcactatagagtacatgagagaccccgatgat
cagtacaagctgacggaggacaccaggcagctgggattggtggtgtgccggggaacatct
gtggtcctcatttgcccccaagacggcatggaggccattcccaatcctttcatccagcag
caggacggctag
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integrated database retrieval system
