Lepisosteus oculatus (spotted gar): 102697527
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Entry
102697527 CDS
T07349
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102697527 (fgd1)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
PH_13
RHG20_PH
PH_16
Motif
Other DBs
NCBI-GeneID:
102697527
NCBI-ProteinID:
XP_015208063
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Position
LG1:complement(2541222..2563422)
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AA seq
1027 aa
AA seq
DB search
MFTRVMTENRTGVISVPVAKETRGGRERARARVCLCETARTEAARAGKSSRLSNLQGWRG
AGVGELRFGSSSSSPRLLTKSLSLEPGPCLGSRETPQRLCSDPGPLGPQDCNGTSERGPP
ELPPAGPKTRPPLPGPKPQVPPKPPHLQGLRLPRGPDKPIPPPPSRPLPADPRAGRATLP
RTEGGATPSCVLSLIEKFEREQIIVVPDISGGCLCPARASEPETETAGEIPPSPPLEPPR
LCPMPLEGRGVPGGTAEGMEGGEEEEEEEGESGAAARCPERRLSCESGYSASDKLLDALE
MRDLLAGQSDVPSDRLSLPPPQTDGKLANRDSGIDSISSPSHSEELCFVGEEERAGLPER
DRPPSPAQPLPPLSPRCPAGEGERGATGGRGVSRYSEGDSDMEEGSGDESELASTPTLQP
SLASPLKAERQDSSELSTQQKVFNIANELLLTEKAYVSRLHLLDQVFCTQLMEEARTRNS
FPSEVVMGIFSNICSIYCFHQQFLLPALEKRMEEWDSNPRIGDILQKLAPFLKMYGEYVK
NFDRAMELVNSWMERSSQFKTIIHDIQKEEVCGNLTLQHHMLEPVQRIPRYELLLKDYLH
RLPQDAPDYKDAQKSLELIATAAEHSNAAIRKMERMHKLLKVYELLGGEEDIVNPTNELI
KEGHILKLSAKNGTSQDRYLILFNDRLLYCVPKLRLIGQKFSVRARIDVDGMELKETSSV
NVPQTFLVSGKQRSLELQARTEEEKKDWMQAIQATIQRHEQTLETFKLLNCSSRDEDYTP
PNSPVSLTTACLRPHTQTHTPVVCGKCSEFRARLLHSGLVASCARPVESQSQWVATTPSH
HVWTIPSVLVLLEPAGSPQKLTSSCLSPLRAGLHGVTRPLSSLPLCAQKQASVVAENSVL
CSFLHHMEKGSGRGWQKAWFVIPENEPLVLYIYGAPQDVKAQRSVPLIGFEISLPEPGDR
LERRFAFKISQSHLTLYFSAEGEELQRRWMEVLSRAGRGEELQGHASISEAAEEEGEEPG
ASTEETT
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtttactcgtgtgatgacggaaaaccgaaccggtgtcatttcggttcctgttgccaag
gaaacacggggagggagggagcgagcgagggcgcgtgtgtgtctgtgcgagacagcgagg
acagaggcagcgcgtgcggggaagtcttctcgccttagcaacctgcagggatggcggggg
gccggggtgggcgaattgcgtttcggctcctcctcctccagtccgcggctcctgaccaag
agcctgtccctggagccggggccctgcctggggagccgcgagaccccccagcgcctctgc
tcggaccccgggcccctgggaccccaggactgcaacggcaccagcgagagggggcccccg
gagctgccccctgcgggcccaaagacgcggcccccgctgcctggacccaagccgcaagtt
cccccaaagccgccccatctgcagggcctgcgccttcctcggggtcctgacaagcccatc
cccccgcctccctcccgccccctccctgcggacccccgggccggccgcgccaccctgccg
cgcacagaggggggcgccactccgtcctgcgtgctgtcgctcatcgagaagtttgagaga
gagcagatcatcgtggtgcccgatatcagtggtggctgcctttgtcctgcccgcgcctcc
gagccggaaaccgaaacggcaggagagattcctccctctcctcctctggaaccacccaga
ctgtgtcccatgccccttgagggccggggggttccaggggggacagctgaagggatggag
gggggtgaggaggaagaggaagaggagggcgagagtggggcagcggccaggtgtcccgag
cgacgcctgtcctgcgaatcgggctacagcgcctccgacaagttattggacgccctggag
atgagggacctgctagccggccaatcggatgtcccctcggaccgcttgtccctccccccg
cctcagacggacggcaagctggccaaccgggacagcgggatcgacagcatcagctccccc
tcccacagcgaggagctctgtttcgtgggggaggaggagagggcggggctgccggagagg
gaccgccccccgagccccgcccagcccctgccccccctctcccctcgctgcccagctgga
gagggtgaaaggggtgccacagggggccggggggtctcccgctactcggagggggacagc
gacatggaggagggcagcggggatgagagtgagctggcctccacgcccaccctccagcct
tccctggccagccccctcaaagcagagaggcaggactcgtctgagctctccacgcagcag
aaggtgttcaacatcgccaacgagctcctgctcacagagaaggcctacgtgtccagactg
cacctcctggaccaggtgttctgcacccagctgatggaggaggctcgaacccgcaactct
tttccctcggaggtggtgatgggcatcttctccaacatctgctccatctactgcttccac
cagcagttcctgctcccggccctggagaagcgcatggaggagtgggactcgaacccgcgg
ataggcgacatcctgcagaagctggctcccttcctgaagatgtacggcgagtacgtgaag
aatttcgaccgcgccatggagctggtcaactcctggatggagcgatcgtcccagttcaaa
accatcatccacgacatccagaaggaggaggtgtgtgggaatctgacccttcagcaccac
atgctggagccggtccagaggatcccccgctacgagctgctgctgaaggactacctgcac
cggctgccccaggacgcccccgactacaaggacgctcagaagtccctggagctgatcgcc
acagcggcggagcactccaacgcagccatccggaagatggagcggatgcacaagttgttg
aaggtgtacgagctgctggggggagaggaggacattgtcaaccccacaaacgagctcatt
aaagaggggcacatcctcaaactgtctgcaaagaacggcacctcgcaggaccgatacctc
atcctgttcaacgacaggttactctactgtgtcccaaaactgaggctcatcgggcagaag
ttcagcgtccgggccaggattgatgtggatggcatggagctgaaggagacgagcagcgtg
aacgtaccacagactttcctggtgtccggaaagcaacgttctctggagctgcaagcacgg
acagaggaagagaagaaagactggatgcaggctatccaggccaccattcagagacacgaa
cagacgctggaaaccttcaagctgctcaactgctcctctcgagacgaggactacacaccc
cccaactcgcccgtgagtctcaccactgcctgcctgcgcccacacacacagacacacaca
cctgtggtctgtgggaagtgttcggagttcagagcgaggctccttcacagtgggttagtg
gccagctgtgcacggcctgtggaatcacagtcacagtgggttgccacaactccatcccat
catgtctggactataccgtctgtcctcgtactgcttgagccagctggaagcccccagaaa
ttgaccagcagctgcctttcacccctgagggccgggctgcatggtgtgacgcggcccctg
tcctccctccctctctgtgcgcagaaacaggcctcagtggtggcggagaacagcgtgttg
tgcagcttcctccaccacatggagaagggctccggcaggggctggcagaaggcctggttc
gtcatccccgaaaacgagccgcttgtcctctacatctacggggcaccacaggatgtgaaa
gcccagcgcagcgtgcctctgatcgggttcgagatctccctgccggagcccggagacagg
ctggagcggcgctttgcctttaagatcagccagagtcacctgaccctctacttcagcgcc
gagggggaggagcttcaacggcgctggatggaggttctgtctagggcagggagaggggag
gagctacagggacacgcctccatctcagaggctgcagaggaggaaggggaggagccaggt
gcctccactgaagagacgacgtga
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