KEGG   Lepisosteus oculatus (spotted gar): 102697540
Entry
102697540         CDS       T07349                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102697540 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loc03019]
    102697540 (wdr61)
Messenger RNA biogenesis [BR:loc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     102697540 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st DSE1_N Beta-prop_EML CFAP251_N Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR19_1st eIF2A Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR41 ASA1 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_HPS5 NBCH_WD40 Tricorn_2nd PROPPIN PAC11 Beta-prop_NUP159_NUP214 PD40 Cytochrom_D1 Ge1_WD40 WDR54 TRM82_WD WD40_like Beta-prop_WDR75_2nd WD_LRWD1 UCP007778 Beta-prop_DCAF12 BCAS3_WD40 Beta-prop_LRRK2 Beta-prop_pof12 Beta-prop_IFT122_2nd NUP37_N GSDH DUF2415
Other DBs
NCBI-GeneID: 102697540
NCBI-ProteinID: XP_006629008
Ensembl: ENSLOCG00000015047
UniProt: W5ND09
LinkDB
Position
LG3:complement(55803889..55811524)
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGRSERDGSETIVTGSLDDLVKVWKWSDEKLELQWTL
EGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWSVAFSPDSKY
IATGSHLGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDRKYLVSGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHASLAGTLSGHGSWVLNVAF
CPDDTHFVSSSSDKSVKVWDVGSRACVNTFFDHQDQVWSVKYNGNGSKVVSAGDDRAIHI
YDCPV
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtacgcaatacagtatacttttcaaacaagagcatgctcacgatgatgcaatatgg
actgctgcctgggggcggagtgagagggatggctctgaaacaattgtgaccggctctctc
gacgatctagtgaaagtctggaaatggtctgacgagaagctggagctgcagtggacattg
gaaggtcatcagctgggggtggtgtctgtggatatcagtcacaatggggccatcgcagcc
tccagctctttagatgcccacatacgactctgggatcttgaatctggcaaacagatcaaa
tcaatggacgcagggccagttgatgcttggagtgtggcattttcacctgactccaaatac
atagccacaggaagtcatctgggaaaggtcaatatatttggtgtggagagtgggaagaag
gaatactccttggacaccagaggaaaattcattctcagtattgcatatagcccagacaga
aaatatttggtcagtggggctatagatggaatcataaatattttcgatattgcaacagga
aaactcctccacaccttggaaggtcatgctatgcctattagatccttgacattctcgcca
gattctcagctcttagtaacagcttcagatgatggttatatcaagatttatgatgtgcag
catgccagccttgcagggacactgagtggccatggttcttgggtattaaatgttgctttt
tgtccagatgacacccactttgtttccagttcttccgacaagagtgtgaaggtctgggat
gttgggtcaagagcttgtgtgaatactttctttgatcatcaggaccaggtgtggagtgtc
aagtacaatggaaatggatccaaggtggtctctgcaggagatgatcgggcaatccatatt
tatgactgtccagtttga

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