Lepisosteus oculatus (spotted gar): 102697598
Help
Entry
102697598 CDS
T07349
Symbol
tulp4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
loc04990
]
102697598 (tulp4)
Domain-containing proteins not elsewhere classified [BR:
loc04990
]
Other domain-containing proteins
Tubby family proteins
102697598 (tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40
SOCS_box
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
102697598
NCBI-ProteinID:
XP_015203992
Ensembl:
ENSLOCG00000016263
LinkDB
All DBs
Position
LG1:complement(28101353..28165152)
Genome browser
AA seq
1623 aa
AA seq
DB search
MFAAVEHGPVLCSDSNVLCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESEGIVSMSWNYPSFLVEDSSESDTDSDDYAPP
QDGPTVYPIPVQNIKPLLTVSFTSGDISLMNNYDDLSPAVIHSGLKDVVVQWCSQGDLLA
VAGVERHGMPADPGCMPSMRNALVKFYNVSGEHIYTLETPAQRPITTICWGHRDSRLFLA
CGPALYVVRVEHRVASLQLMCQQAVASALREEKDISKLTMPSRLCSYLTTAFIPTIKPPI
PDPNNMRHFVSYPTPGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPKTDGKADEVYGNSLISSVIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSP
KLPRINIEARKSPKLSRAAQEISRSPRLPIRKPSVGSPSLARREFPLEDITQHNYLAQVT
SNIWGTKFKIVGLTSFLPTSLGSVVYKTSLLHLQPRQMTVFLPEVVKVSMDYINLPVFNP
NVFSEDEDDLPVTGPSGVPDDNPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ
LDVLTNPTAAAVNVAAAAAVAGVSDHGQESMMTSQYPVSSRYTNPGQVIFGGLEMGRLLV
GPPPSHHQQQQPPQMQMPQPPIPSNPPQIPVHQLPPTVSEHGSEISRDHEHLQKGKPLRS
IPQLADGDAVVFSAPLEIQISKMNPPPPYPGTVAAAAAAVAAAAAAAAASAANSNNPAAP
PVDLCLKKNEFSLYPPAPQYQTPLGYERITTFDSSGNVEEVCRPRTRIVCNQNMYALQGP
GSSATLRVTSSESKKVQLPCASATLNRLTVPRYSIPSGDPPPYPDPANQTSLGRNPGQRI
DSSLIHATLRRNSREAVLKVSQMMDSHRTLPTKSKVNSALAASYQQRVSTALYTCSQCSN
NSNSTAGTTGAGGSGSSNSNGITGGSIVRQDFAAGSAAQHSTVIVHSNSTSPLASQSSYN
LLSPPDNCRDRTEYINSAFTEDEALNQQCQLEKSLRHLTLGEVGLAVKRPPPYQWDPAAT
EEIWVPQERTPLGAPPGTHKPPPLILNPAQHLDVSRLPFVLSSKSPTSPNATFQAGYQIA
LPFPPGAGYSGPQLQAMPPPPQPCSPKEVVAPVPFPQQEPAMVLPPGYPANLANLACCPL
PPMYPGTSSCAGLQLPPIGLHPWNTYSPCPPMQNPSGTLPTKAHLVVEKPVLSPPPPPAD
LQNHMTSPEAMDEAGETFQEVNESPIPQRADKFSKKSRKRLDSRAEEANVPAITEGKVKK
EGRALGDFNSLISSPRLGREKKKPKSQKEQLKAKKLNKTNEFQDSSESEPELFISGDELM
NQSQSSKKGWKSKRNLRTASELDEFKCRKANEKEDRGLGSEDFVYIMANKQPLWNEATQV
YQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQ
RLK
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggcagtggaacatggtcccgtcctctgcagcgactccaacgtcttgtgcctg
tcctggaagggccgggtgcccaagagcgagaaggagaaaccggtgtgccggaggcgatac
tacgaggaagggtggcttgcaacaggcaacggcagaggtgtggttggagtgaccttcacc
tccagtcactgcaggcgggacaggagcaccccgcagagaattaacttcaatttaagaggc
cacaacagcgaggtggtactggtgcgatggaacgagccctttcagaaactggctacatgc
gacgcggatggaggaatattcgtctggatccagtacgaaggcaggtggtctgtggagctc
gtgaacgatcggggtgcccaggtcagtgacttcacctggagccatgatgggacccaggcc
ctcatctcctacagggatggctttgtgctggttggctcagtcagcggacaaagacattgg
tcctcagagattaatcttgagagccagataacctgtggcatatggacaccagatgaccaa
caggtgctgttcggcaccgcggacggacaggtgattgtgatggattgccacgggcgcatg
ctggcccacgtgctgctccatgagtccgagggcattgtgagcatgtcctggaactacccc
agcttcctggtggaggacagcagcgagagcgacacggactcggacgactatgccccgcca
caagatggtccaactgtctatccaattccagtacagaacatcaaacctttgctaaccgtc
agcttcacatctggggacatcagtttaatgaataactatgatgacctctcacctgctgtg
atccactcaggactgaaggacgtggttgtgcagtggtgctcgcagggtgacctcctggct
gtggctggggttgagaggcacggtatgcctgcagatccaggatgtatgcccagcatgagg
aacgcactggtcaagttctacaatgtctctggagagcatatctacaccctggagaccccc
gcccagcggccgatcactactatatgctgggggcaccgggactcgcggctctttctggct
tgcgggccggccctatacgtggtcagggtggagcaccgggtcgccagcctgcagctcatg
tgccagcaggccgttgccagtgcgctgcgggaagagaaggacatcagcaagctgactatg
ccatcccgcctctgctcttacctcaccacggccttcataccaaccatcaagcctcccatc
cctgatcccaacaatatgcgccattttgtgagctacccaacccctggcaatgagaggctc
cactgcaccatgaagcgcactgaagacaatcctgaagtcggtgggccctgctacaccctg
tacttggagtatctcggcggtctagtacccatcctgaaaggacggcgcatcagcaagctg
cggcctgagtttgtcatcatggatcccaaaactgatggcaaagcagatgaggtttatgga
aacagcttgatttcctctgtgatcgacagctgtaactgctctgactcgagcgacattgag
ctgagtgatgactgggtgggaaagaaatctccaaagatctcgagaggcagcaaatcacct
aaactcccaaggattaatattgaagctagaaaatctcctaaactatcccgggctgcacag
gagatatcccggtcaccacggttaccaatcagaaaaccttctgttggatctcccagcctg
gctcgtagagagtttcctttagaagacatcactcagcataattatcttgctcaggtcact
tcgaacatttggggaacgaagtttaaaatcgtaggactcacgtcctttttgccaactagt
cttgggtcagttgtttacaagacaagtttgctgcatctccagcccagacagatgaccgtt
ttcctgccagaagtggttaaagtttccatggactacatcaaccttcctgtattcaacccc
aatgtgttcagtgaagatgaagatgatctgccagtaactggaccttctggtgtgcccgat
gacaaccccccttgcacggtcaacattcccattgctccaattcacagctctgctcaggcc
atgtccccaactcagagcattggactggttcagtccttgctggccaatcagaacgtgcag
cttgacgtcctgaccaatcccaccgcagcagcagtaaatgtagcggcggcagcggcggtt
gcgggagtctcagatcacggccaagaaagcatgatgactagccagtatccagtgtccagc
aggtatactaatccaggccaggtgatctttggagggttggaaatgggacgcctccttgtt
ggaccccctccctcccatcatcagcagcagcagccaccacagatgcagatgccacagcct
cccataccttccaatccgccccagattccagtgcaccagctgccccctacagtgagcgaa
cacgggtcagagatcagccgagatcacgagcacctgcagaagggcaagccgctgcggtca
atccctcagcttgcggatggggatgcggtggtcttcagtgccccgctggagatccagatc
agtaagatgaacccccctccaccatatccaggaacagtggcggcggccgccgcagcagtg
gcggcggcggcggcggcggcagcagcctctgcagccaacagcaacaaccccgctgctccc
cctgtggacctctgcctgaagaagaacgagttctcgctttaccctccagcccctcagtac
cagaccccactgggctatgagcgaattactaccttcgacagtagtggaaacgtcgaggag
gtctgtcgaccgcgcacccggattgtctgcaaccagaacatgtatgctctgcaaggccca
ggcagctctgccaccctaagagtcacttcctccgagagcaaaaaggtacagcttccctgt
gcgtcagccacgctcaaccggctcacggttccacgttactccatacctagcggtgaccca
cccccttaccctgaccctgccaaccagacaagtttggggaggaatcctggccaacgcata
gacagcagcctcattcacgccactctgcggcgcaacagcagggaggcggtcctcaaggtc
tcccagatgatggattcccacaggactctcccaaccaagtcgaaagttaacagcgcatta
gctgcatcttaccaacagagagtgtcgaccgcgctgtacacctgcagccagtgcagtaat
aacagcaacagcactgctggaactacaggcgctgggggcagcggcagcagtaacagcaat
ggcattacgggcgggagcattgtccgtcaagattttgcagcaggcagcgctgctcaacac
agcacggtcattgtccactccaatagcacctcacctctggcttcccagtcgtcctacaac
ttgctgagtcctccggacaactgcagggacaggacagagtacatcaattctgccttcact
gaggatgaggcccttaaccagcagtgccagctggaaaaatctctccggcacctgactctt
ggtgaggtgggtctggctgtaaagcggccgcctccctatcagtgggatcctgcagccact
gaagagatctgggtccctcaggaacggactccactgggagcccctcctgggactcacaag
cctcctcctcttatccttaacccagcccagcacttagatgtgtctcggctgccatttgtc
ctctcatctaaatctcccaccagcccaaatgccactttccaggcgggttaccagattgcc
ttaccctttcctccaggagctggttacagtggaccccagcttcaggccatgccgcctcct
ccacagccctgttcacctaaagaagttgtggcacctgtccccttcccacagcaagagccc
gctatggtccttccacctggttatccagctaacctggccaacttggcctgctgtccactg
ccacccatgtacccaggcactagctcatgtgctggccttcagctgccccccataggcttg
catccttggaacacttacagcccttgtccacctatgcagaacccctcagggaccctgccc
accaaagcccacctggttgtggagaaaccagttctttctcctccccctcctcctgccgac
cttcagaatcacatgacctcccctgaggccatggacgaggcaggggaaaccttccaggaa
gtgaacgaaagccccattccccagcgtgctgacaagtttagcaaaaagagccgcaagagg
ttagacagtcgggcagaggaggccaacgttccagctatcacagagggcaaggtgaagaag
gaaggcagggctctcggcgactttaattctctgatctccagccctcggcttggccgagaa
aagaagaagcccaagagccagaaggagcaactcaaagctaagaagctgaacaagaccaat
gagttccaagacagttcagaaagcgagccagagcttttcatcagtggggatgagctcatg
aaccagagccagagcagcaagaagggctggaagagcaaacgaaaccttcgcactgcaagc
gagcttgacgagttcaaatgccgcaaggccaatgagaaggaggaccgtggtctgggcagc
gaggactttgtctatattatggccaataagcagcctctatggaacgaggctactcaggtc
tatcagttggactttggaggacgagtcacacaggagtctgcaaagaactttcagattgaa
ctggaaggaagacaggtgatgcagtttggtaggattgatggcaacgcttacatcctggac
tttcagtacccgttctctgcagtgcaggccttcgctgtggccctggccaacgtcacccag
cgcctcaagtga
DBGET
integrated database retrieval system