Lepisosteus oculatus (spotted gar): 102697602
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Entry
102697602 CDS
T07349
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102697602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
loc02000
]
102697602
Transporters [BR:
loc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102697602
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102697602
NCBI-ProteinID:
XP_015196504
Ensembl:
ENSLOCG00000014677
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Position
LG2:complement(66549877..66558192)
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AA seq
592 aa
AA seq
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MDGGRGEQERGHWASKLEFLLAVAGDVVGLGNVWRFPYLCYRNGGGAFLVPYLVFVVTCG
VPLFLLETAMGQYTNEGSITSWRRMCPLFEGIGYAGQLILVYSCMSYIIILAWALYYLYN
CFSKELPWASCENIWNTDACVDLDKRNHSSNWTTLQNTSSAATEFWERHVLSISPGLEQL
GSVRWPLLVCLVIMWVICYFCIWKGVRSTGKAVYFTATFPYLMLLVLLVRGVSLPGAMEG
IIFYLYPDPARLSDPQVWLEAGSQIIFSYSVCVGILIVLGSYNQYNNNCYRDCFQLCVLN
SGTSFVAGFAVFSVLGFMAHEQGVPIAEVAESGPGLVFIAYPQAVAMMPLPHLWASCFFI
MIILLGMDTQFLAIESIITSVSDLFPSVLRRPGRRELVLLLFCIACFLVQLVMVTEGGMY
LFQLFDYYASNGTCVLLLAVFQTIGLGWVFGADRYNDIIEDMVGTRPNPWFKYCWLFFTP
LLALGTCVMSLVDFQPLVFNRTYVYPGWAYVLGWLLAGSSIITTPLVMLFKLSRARGSLS
QRLTFLCRPDDDLPLMKKQGVEVCPLNSEPQRYPDAPDPSTETEMRMLRRQI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacgggggacgtggggagcaggagaggggccactgggcctccaagctggagttcctc
ctggccgtggccggggacgtggtggggctcgggaatgtgtggcgtttcccgtacctgtgc
tacaggaatggcggaggtgccttcctggtgccctatctggtgttcgtggtgacgtgcggc
gtcccgctgttcctgctggagacagccatggggcagtacaccaacgagggcagcatcacc
agctggaggaggatgtgtcccctcttcgaggggattggctacgcaggccagctgattctg
gtctacagctgcatgagttacatcatcatcctggcctgggctctgtactacctctacaac
tgcttcagcaaggagctgccctgggccagctgtgaaaacatctggaacacagatgcctgt
gtggatcttgacaagaggaaccacagctctaactggaccactctgcagaacaccagctcc
gctgccacagagttctgggaaagacacgtcctgagcatctctccagggctggagcagctg
ggcagtgtgcggtggccactcctcgtgtgtctggtcatcatgtgggtcatctgctatttc
tgcatctggaagggggtccggtccacagggaaggcggtgtatttcacagccaccttcccc
tacctgatgctgctggtgctgctggtccgaggggtctccctgcctggtgccatggaggga
atcatcttctatctgtaccctgatcctgcccggctgagtgacccacaggtgtggttggag
gcaggatcccagatcatcttctcctacagtgtctgtgtgggaatcctcatagtgctcggc
agctacaaccagtacaacaacaactgttacagggactgctttcagctgtgtgtgctgaac
agcggcaccagcttcgtggcaggtttcgccgtgttctcggtcctgggcttcatggctcac
gagcagggggtgcccatcgccgaggtggcagagtcgggccctggcctggtcttcatcgcc
tacccgcaggctgtggccatgatgcccctccctcatctctgggcctcctgcttctttatt
atgatcatcctcctggggatggacacacagtttttggccatcgaaagcatcatcacctcc
gtctcggacctgttcccctccgtcctgcgcaggcctggccgcagggagctcgtcctgctg
ctgttctgcatcgcctgcttccttgtccagctggtcatggtgacagagggcgggatgtac
ctgttccagctctttgattactacgcctctaacggcacctgcgtcctgctcctggctgtc
ttccagaccatcggcctgggctgggtattcggtgctgaccgctacaacgacatcatcgag
gacatggtgggcactcggcccaacccctggtttaagtactgctggctcttcttcaccccg
ctgttggcactgggcacttgtgtcatgtccctggtagatttccagcctctggtgttcaac
aggacctacgtgtacccaggctgggcctatgtgctgggctggctcctggccggctcctcc
atcatcaccacccccctggtcatgctcttcaaattgtcccgggccagagggagcctgagc
cagcgtctcacatttctgtgccgccctgacgatgacctccccctcatgaagaagcaggga
gtagaggtctgccctttgaactctgaaccccagaggtaccctgatgcacctgatccctcc
acagagacagaaatgaggatgctcaggcgtcagatatag
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