Lepisosteus oculatus (spotted gar): 102697757
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Entry
102697757 CDS
T07349
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102697757 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loc03400
]
102697757 (rad54b)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102697757 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
102697757
NCBI-ProteinID:
XP_006636185
Ensembl:
ENSLOCG00000010100
UniProt:
W5MVF2
LinkDB
All DBs
Position
LG11:34160986..34200777
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AA seq
940 aa
AA seq
DB search
MRRSGAPSQLCGNVAKKPRFVPPASMHMRAASVPDPKRPSPPLCNALNKVTAPQENKSEA
PVLSKALARILNAVPLGDTEENSSTLQGLSDSLTVREEESDHRTPDDSRPLLSVSIQPTP
APRRAKPDPSPGGQGSPDSAARYFSVVWCKASKKKHKRWEGDAVLVARGRSVVLKDLEGK
DIGRGTGYKSSELESLAEGQSLMVGGKEIEVMGAVSAEDFSSGRCFHEGPAEAAAAPPVP
ARRPAQKPFAGPARKSGSGALQRAPETEAGCRPRHDPLAPGALVMPRPTLNHQWLFNKAG
LQVVDVVVDPYLTAHLRPHQREGVVFLYECVMGMRAAGRHGAILADEMGLGKTLQCVALL
WTLLRQGPYGGRAVLRRALVVTPGSLVRNWGAEFQKWLGGQRIGVFAVDQDHKVEEFVNS
QIYAVLIISYEMLLRSVEQIQRVEFGLIICDEGHRLKNSSIKTSSALSSLSCERRIILTG
TPVQNDLQEFHAIIEFVNPGILGSSSAYRKVYEEPIVKSRQPSSTGEEKRLGAERAAELA
RLTGLFILRRTQEIINSYLPPKLEWIVFCQPTPLQLEVYRNILSCRLVRSCLQGALENSP
HLVCIGALKKLCNHPGLLYATIREREDRARSDCADAAESSLYEGLSGLFPEGYSSEGLDA
SDSGKLMVLTDLLAAIRQLSPADRVVLVSNYTQTLDMLQDLCRRCGYRSTRLDGQTPVSQ
RQKIVDVFNSRYSSDFVFLLSSKAGGVGLNLVGASHLVLYDVDWNPANDIQAMARVWRDG
QKRTVHIYRFLTTGTIEEKIYQRQISKQGLSGAVVDLSKRAAHISFSSEELRNLFTLHED
SECVTHDLLGCRCRSGDSAGGLAAEVKPLMERSCQLGRKSEKPSTQKYLSISELMQWKHY
SGSNPTFSDPFLDRAREHITFAFQSTSESQMSPITNSPCE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggtcaggggctccaagtcagctgtgtggcaatgtggccaagaagcccaggttt
gtgcccccggcatcgatgcacatgagagctgcttctgtgcccgacccgaaacgccccagc
cctccgctgtgcaatgcgctgaacaaggtgacagctccccaggaaaataaatcggaggcc
cctgtcttatccaaagccttggcaagaatccttaatgctgttcccctgggtgacaccgag
gagaacagctcaacgctgcagggactctccgatagtcttactgtgagagaagaagagtca
gaccacaggactccagatgattcccggcccctcctttcggtgtcgattcagccgacgccg
gcccctcgccgggcaaagccagacccgtccccgggagggcagggcagcccggacagcgcc
gccaggtacttcagcgtggtgtggtgtaaagcgtccaagaagaaacacaagaggtgggag
ggggacgccgtgctggtggccagagggaggagcgtggtgctgaaggacctggaaggcaaa
gacatcgggagaggcactggctacaagtcctccgaactggagagcctggccgaagggcag
tcgctgatggtcggcgggaaagagatcgaagtgatgggcgccgtctccgcggaggacttc
agcagtggccgctgcttccacgagggccctgcggaagccgccgccgcgccccctgtccct
gcgcgcaggccggcccagaagcccttcgccgggcccgcgcggaagagcggctcgggggcg
ctccagcgagccccggagactgaagcagggtgcaggccccgccacgaccctctcgcccca
ggagctctggtcatgcctcggcccactctgaaccaccagtggctgttcaacaaggctggt
ctacaggtggtggacgttgttgtggatccttacctcactgcccacctcaggcctcatcag
agagagggcgtcgtcttcctgtacgagtgtgtcatgggaatgagggcggccggccggcac
ggcgccatcctggccgacgagatgggcctggggaagaccctgcagtgcgtcgccctgttg
tggaccctgctgcgccaggggccctacggcggcagagccgtcctccggcgggcgctggtg
gtcactcccggcagcctggtgcgcaactggggcgcggaattccagaagtggctgggcggg
cagcggatcggcgtgttcgccgtggaccaggatcacaaagtcgaagagtttgtcaactct
cagatctacgctgtgctcattatcagctatgagatgctgcttcgctccgtggagcagatt
cagagggtggagttcggcctcatcatctgtgatgaggggcaccgcctgaaaaacagcagc
atcaagacctcctcggcactcagcagcctgtcctgtgaaagaaggatcattctcacaggc
actcctgtgcagaatgacctccaggaattccacgcaatcatagagtttgtgaatcctgga
atcctgggctcttcctccgcatacaggaaggtgtacgaggagcccattgtcaagtcccgg
cagccatcttctacaggggaggagaagcgcctgggtgcagagagggcggcagagctggct
cgcctgactgggcttttcatcctgcgcaggacccaggagatcatcaacagctacctgccc
cccaaactggagtggatagtgttctgccagcccacacccctccagctcgaggtctaccgc
aacatcctcagctgccgcctggtcaggtcctgcctgcagggggcgctggagaacagccct
cacttggtctgcattggagcactgaagaaactctgcaaccacccgggcctcctgtacgcc
actatcagggaaagagaagacagggccaggagtgactgcgctgatgcagccgagagctct
ctgtacgaaggcttgtctgggctcttccctgaggggtactcttcagaggggcttgacgcg
tcggattcaggaaagctgatggtgctcacagacctgcttgcagcgatccgccagctgagt
cccgccgacagagttgtgctcgtgtccaattacacccagactctggacatgctgcaggac
ctgtgccggcgctgtgggtacaggtccacgcggctggacgggcagaccccggtctcgcag
cggcagaagatcgtggacgtcttcaacagcagatactcctccgactttgtgttcctgctg
agctccaaggcagggggcgtggggctgaacttagtgggagcctcgcacctcgttctctac
gacgttgactggaacccagccaacgacatccaggccatggccagggtgtggagagatggt
cagaagagaactgttcacatctaccgtttcctcaccacaggcactatcgaagagaagatc
taccagaggcagatcagcaagcaggggctgtccggagccgtggtcgacctgtccaagagg
gccgctcacatcagcttctcctcggaggagctgcggaacctcttcactctccacgaggac
tcggagtgcgtcactcacgacctgctcggctgccgctgccgatccggcgactccgcggga
ggtctggctgcagaagtaaaacccctgatggagagaagttgtcagctgggtcgaaaaagt
gagaagcccagcacacaaaagtatctgtcaatctccgagctgatgcagtggaaacactat
tctggaagcaaccctaccttttctgatccttttctagacagagccagagaacatattact
tttgctttccaaagtacctctgaatctcagatgtctcctatcaccaattccccttgcgag
taa
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