Lepisosteus oculatus (spotted gar): 102697935
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Entry
102697935 CDS
T07349
Symbol
eif4b
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
102697935 (eif4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102697935 (eif4b)
03012 Translation factors [BR:
loc03012
]
102697935 (eif4b)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102697935 (eif4b)
mRNA cycle factors
Stress granule specific factors
102697935 (eif4b)
Translation factors [BR:
loc03012
]
Eukaryotic type
Initiation factors
eIF-4
102697935 (eif4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
102697935
NCBI-ProteinID:
XP_015199768
Ensembl:
ENSLOCG00000005500
LinkDB
All DBs
Position
LG4:14151453..14168293
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AA seq
662 aa
AA seq
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MADWKITGSNFVWSNTVVVLSNVLHSVSFTCSSKKKNKKGKTLTLTDFLAEDSGGSTPSY
PTAKPTSWADETDDLEGDVSTAWHTDDDVYRAPIDRSILPTAPRAAREPNIDRSRLPRSP
PYTAFLGNLPYDVTEDSIKDFFRGLSISAVRLPREPSNPERLKGFGYAEFDDVDSLMRAL
SLNEENLGNRRIRVDIADQSQEKDRDDRSMSGRDRDRNRGDGGPDKTDSDWRARPSADSD
DPGPRRDDAFGERSRDRYESDRYRDGPRRDNDRGFEGGRDRYRDRYEDRDRRDFDRGFDS
RGGGRRPFGSGFRRDYDDRRDDFRGSGDRYGERYGERDDRYDRRDERREDRGEDSSGGSL
QVAGPPQRPKLNLKPRSVPKEDDPGAPSAQTGRAASIFGGAKPVDTAAKEREVEERLKKE
QERLQRQLEEDKGRAAERRPRERHPSWRSEDQPAERSRTGSESSQPGSTSGRGSRRRESE
RSVENEVFGRDEDPPSPGTRPPAKQDALPLKVVPAPPPKENAWAKRSNVSGGTSEGEGRS
PVSPGSTAPPKLTSPLGPADDKISPKGKDENKADGVRLDRGPAKGRGGSTGPGTGRGRGD
GANRDRRREADRKDSRRERESRAAPEPKKYEESPSPKFSSASKYAALLMDGEQADDAEEN
TD
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcagactggaagatcacaggttcaaattttgtctggagcaatactgttgtggtcttg
agcaacgtacttcactcagtaagcttcacttgttccagtaagaagaagaacaagaagggg
aagaccttaactctgaccgatttcctggcagaggacagtggtggcagcacccctagctac
cccacggccaagcccaccagctgggcagatgagacggatgacctggaaggagatgtttcc
actgcctggcacacggatgatgacgtttatcgtgcccctatcgaccgctccatcttgccc
acggcaccccgggccgcccgagagcccaacatcgaccgctcccgcctgccccgcagcccc
ccctacaccgccttcctgggaaacctgccctacgacgtcaccgaggactccatcaaggac
ttcttcagggggctcagtatcagcgctgtgcggctgcccagagagcccagtaaccctgag
cgcctcaaaggcttcggctacgcggagttcgacgatgtggattccctgatgagggccctg
agcctcaacgaggagaatctggggaaccggagaatccgtgtggacattgcagaccagtca
caagaaaaagaccgtgatgaccgctcaatgtcaggccgggaccgagacagaaaccggggt
gacggaggccccgacaagacggacagtgactggagggcacggcccagtgcagatagtgat
gacccggggccccggcgagacgatgcctttggagagcgatcacgggatcgctatgagtcc
gatcgctaccgggatggcccacgccgggataatgaccgagggtttgaggggggcagagac
cgctatagggataggtacgaagaccgggatcgccgggacttcgacagaggctttgactca
cgtgggggaggccggcgtcctttcggcagtgggttccgccgcgactacgacgatcggcgt
gatgattttcggggcagcggggatcgctatggcgagcgatacggggagcgcgatgatcgg
tacgaccgcagggatgagcggcgcgaggacagaggtgaggactccagtggagggtctttg
caggttgctggccccccccagaggcccaagctgaacctcaaaccccgcagcgtccccaag
gaggatgacccgggggccccttcagcgcagacgggccgtgcagcctccatcttcggaggg
gccaagcccgtggacacggcggccaaggagcgggaggtggaggagaggctgaagaaggag
caggagcggctgcagaggcagctggaggaggacaagggcagggcagcagagcggcggccc
agggagaggcaccctagctggcgcagtgaggaccagcctgcagagcgatcccggacagga
agtgagtcatcgcagccaggcagtacttctggtcgaggatcccggcgcagggagagtgag
cgctcggtggagaacgaggtgtttggccgtgatgaggaccccccctctcccgggacccgc
cccccagccaagcaagatgccctgccactgaaagtggtcccggcccctccgccgaaggag
aatgcctgggccaagcgcagcaatgtgtctggagggaccagcgagggagaagggcgctct
ccggtgtcacctggtagtactgcaccaccaaaactgaccagtcccttaggtcctgcagat
gataaaatctctcccaaaggaaaagatgagaacaaggctgatggtgtgcgactggacaga
ggccccgcaaaggggcgggggggttcaacaggtcctgggacagggagggggcgaggagac
ggagcgaacagagaccggcgaagggaggccgacaggaaagacagcagaagggaacgagaa
tccagagcagcacctgagccaaagaaatatgaggagtccccaagccctaagttcagctca
gcaagcaagtacgcagccctgctgatggacggcgagcaagcagatgatgcggaggagaac
acggattaa
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