Lepisosteus oculatus (spotted gar): 102698007
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Entry
102698007 CDS
T07349
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102698007 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102698007 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102698007 (nfkb2)
Transcription factors [BR:
loc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
102698007 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
TelA
Motif
Other DBs
NCBI-GeneID:
102698007
NCBI-ProteinID:
XP_015203362
Ensembl:
ENSLOCG00000012413
LinkDB
All DBs
Position
LG5:complement(35435685..35465994)
Genome browser
AA seq
915 aa
AA seq
DB search
MSGNLRMDENTYMIDNEIILGDYSMLPHMNMNIKAEPFLETVHGPYLQIIEEPKQRGFRF
RYECEGPSHGGLPGASSEKNKKTYPTVKVCNYVGYARVEVQLVTHTDPPRVHAHSLVGKQ
CNENGVCSITVGPNDLTAQFNNLGILHVTKRGVMDVLTKRLREERKKLRSCHFTDAEEQE
IVNEAKELSKVMDLNVVRLKFTAYIQDSDGAYTRALKPAISNPIYDSKSPNASNLKISRM
DKTCGSVLGGDEIFLLCDKVQKDDIDIRFYEDEDGGWEAFGDFAPTDVHKQYAIVFKTPQ
YHSTEIDRPVTVFLQLKRRKGGDCSEPKQFTYVPQVQDKEEVQRKKQKPLPHYHDHWRGP
AMGGSGGPGRGPGGFGPGGAGGGGDSYFPFPQAMDGSFLGQFGGFQGGSQMAGLAQPQDN
SGNQQNGAPHGGPSLQQQLLQLAALLQSRATQMARRTAGALLDYSSTGDVRMLLAVQRQL
CAVQDENGDTPLHLAIIHQQSAVVEQLVQVIISIPEQKILNICNHLLQTPLHLAVITKQH
KVVDFLLKAGADPSHLDRYGKSVLHLAAPMGDETMLRILLGHLGERHANLLNTSDYSGLY
PVHLAVRRGGDRCLRMLVEAGANVNVAERKSGCTALHLAVQQDLLGIACTLVTELKAEVN
LSTFGGNTPLHLAASQGSPVLCSMLIAAGAEKRVENDEPLFFSSSSSSDDDDDEEGRSTT
SRLPRGENRLSPADSGTTVAPDPQPCRVTSNPRKRPARGHTPYDLAKCQRVRDVLESKPR
PSTSKDTTLSPQAEEEGKMDGETLNKLCGILRKVDVQWKQLAEKLGMLMLADLYKECPSP
CRSLLEGYQLGGGRVEGLVEALEAMGLNEGVRLLRQTELKNKTPSTEVKVDSGFCSHPTE
ELQEEHMEESVLANS
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaatctgaggatggatgagaatacttacatgatagacaatgagatcattctg
ggggattacagcatgttgccacacatgaacatgaacattaaagcagagcccttcctggag
acagtgcatgggccctatctgcagattattgaggaacccaaacagagagggttccggttc
cgttacgaatgtgagggcccctctcatggagggctgccaggggcgtccagtgaaaaaaac
aagaagacatatcccactgtcaaggtgtgtaactatgtaggctacgcaagagtggaagtt
caactggtaacacacactgacccaccccgggtacacgcccacagccttgtgggcaaacag
tgcaacgagaacggagtgtgcagcatcacagtgggcccgaatgacctcactgcacagttc
aacaacttggggatcctgcatgtaaccaagaggggagtgatggatgtcctgaccaagcgg
ctgagagaggagaggaagaagttgcgaagttgccatttcactgatgctgaagagcaggag
attgttaatgaggctaaagagctgagcaaggtgatggatctcaacgtggtgaggctaaag
ttcactgcctatatccaagacagtgacggagcatacacccgtgccctgaagccagccatc
tccaatcccatctacgacagcaagtcccccaatgcatccaacctgaagatctctcgcatg
gacaagacctgcggctcagtgttggggggagatgagatctttctgctctgtgacaaagtt
cagaaagatgacattgacattcggttctatgaggatgaggatgggggctgggaggccttt
ggagactttgctcccactgacgtccataagcagtacgccattgtgttcaagacgcctcag
taccacagcacagagatcgaccggcccgtcaccgtgttcctgcagctgaagcgaagaaag
gggggtgactgcagcgagcccaagcagttcacatatgtgccccaggtccaagacaaggag
gaggtgcaacgcaagaagcagaagcccctgccccactaccatgaccactggcgtggtcca
gccatgggaggctcaggaggcccagggagagggcctgggggcttcgggccaggaggagcc
ggaggtgggggagactcctatttccctttccctcaggctatggatggaagcttccttggc
caatttggggggttccaggggggctcccagatggccggtttagcacaaccccaagataac
agtggaaaccagcaaaatggggcaccacatgggggcccctccttacagcaacagctccta
cagcttgctgccctgcttcagtccagagccacacagatggccaggcgaacagcaggggcc
ttgctcgactactccagcacgggggatgtgcgcatgctgctggcagtgcagagacagcta
tgtgcagtgcaggacgagaatggagacacacccctacacctggccatcatccaccaacag
tccgctgtggtagaacagctggtccaggttatcatcagtatccctgagcagaagatcctc
aacatctgcaaccacctgctccagactcccctgcacctggcggtgattaccaagcagcac
aaggtcgtggacttcctgttgaaggccggggctgacccctcccacttggaccgctatgga
aagtctgttttgcacctggctgcacctatgggtgatgagaccatgctccgcatcttgctg
ggacacctgggggaacgccatgctaacctgctcaacacctctgattacagtggcctttac
ccagttcacctagctgtgaggcgggggggagaccgctgtctgcggatgctggttgaggca
ggagcaaacgtcaatgtggccgagcgcaagagtggctgcactgcactgcaccttgctgta
cagcaagacctgctgggaatagcctgcacacttgtcacagagctgaaggcggaagtgaac
ctgagcacatttggaggaaacacccctcttcacctggctgccagtcagggctccccagtg
ctctgctccatgctgatcgctgcgggcgctgaaaagcgtgtggagaatgatgagccactc
ttcttcagctcttcctcttcttctgatgatgacgatgatgaggaggggagaagcacgacc
agcaggctgcctaggggagagaatagactatctccagcagacagtggcacaactgttgcc
ccagacccacagccgtgcagagtgacttctaacccacgcaagagacctgcccggggtcac
accccctatgatctggccaagtgtcagagggtccgggatgtcctggagagcaagccacga
cccagcaccagcaaggacacaaccctgagcccgcaggcagaagaggaagggaagatggat
ggggagacactcaacaagctgtgtgggatcctcagaaaagtggacgtccagtggaaacag
ctggcagagaaattaggcatgcttatgctggccgacctttacaaggagtgcccgtcaccc
tgcaggagcctgctggagggctaccagctgggaggaggtcgagtggaagggctggtggaa
gcactggaggctatggggctgaatgaaggagtgaggctgctgagacagacagaactgaag
aacaagacaccaagcacagaagtcaaggttgacagtggattctgcagccatcccacagaa
gagctgcaggaagagcacatggaggagtctgtcttggccaactcctga
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