Lepisosteus oculatus (spotted gar): 102698010 Help Entry 102698010         CDS       T07349                                  Symbol xab2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism loc  Lepisosteus oculatus (spotted gar) Pathway loc03040   Spliceosome Brite KEGG Orthology (KO) [BR:loc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102698010 (xab2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:loc03019]     102698010 (xab2)    03041 Spliceosome [BR:loc03041]     102698010 (xab2) Messenger RNA biogenesis [BR:loc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      102698010 (xab2) Spliceosome [BR:loc03041]  Complex B   Other components    Prp19-related factors     102698010 (xab2)  Complex C     102698010 (xab2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_12 TPR_2 TPR_8 TPR_15 ARM_TT21_C ARM_TT21 TPR_16 TPR_MalT TPR_1 NRDE-2 LTN1_E3_ligase_6th Motif Other DBs NCBI-GeneID:  102698010 NCBI-ProteinID:  XP_015204764 Ensembl:  ENSLOCG00000006992 LinkDB All DBs Position LG6:13781865..13793448 Genome browser AA seq 708 aa AA seqDB search MPSLTEKREVTFEEEDLPYEEEIIRNPYSVKCWMRYIEHKQSGPKSVLNMVYERALKELP GSYKLWYNYLRERRKQVKGKCVTDLSFEEVNNCHERALVFMHKMPRIWLDYCQFLVDQCK ITRSRRTFDRALRALPVTQHFRVWPLYLRFVCRYPLPETAVRVYRRYLKLCPENAEEYIE YLRSVNRLDEAAVRLAAIVNDETFVSKEGKSNYQLWHEMCDLISQNPDKVKSLNVGAIIR GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDMYEESIQTVVTVRDFTQVFDSYAQFEES MIAAKMETNSEMGQDEEDDIDLELRLARFEQLINRRPLLLNSVLLRQNPHNVHEWHKRVK LYEGKPREIINTYTEAVQTVDPMKATGKPHMLWVSFAKFYEENEQLDDARTIFEKATKVN YKQVDDLASVWCEYGEMELRHENYDQALRILRKATAIPSKKAEYFDASEPVQNRVYKSLK VWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYSMFLEEHNYFEESFKAYERGI ALFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKYAKTIYLLYAKLEEE YGLARHAMAVYERATQAVEVGEQYEMFNIYIKRAAEIYGVTHTRSIYQKAIEVLPDEHSR EMCLRFADMECKLGEIDRARAIYSYCSQICDPRVSIFYFTWGTWRHLS NT seq 2127 nt NT seq  +upstreamnt  +downstreamnt atgccgtcattaacggaaaaacgagaggtcacatttgaggaagaagacctcccctatgaa gaggagatcatccggaacccctactccgtcaagtgctggatgaggtacatcgagcacaag cagagtggtcccaagagcgtcctcaacatggtgtacgagagggcactgaaggagctgccc ggcagttacaagctgtggtacaactacctgagggagcgcaggaaacaggtgaaggggaag tgtgtcaccgatctgtccttcgaggaggtcaacaactgccacgagagggcgctggtcttc atgcacaagatgccgcggatctggctggattactgccagttcctggtggatcagtgcaag atcacgcgcagccggcggacgttcgaccgcgcgctgcgggcgctgcccgtcacccagcac ttccgcgtctggccgctctacctgcgcttcgtctgccgctacccgctgcccgagacggcc gtcagggtctaccgccgctacctcaagctgtgcccggagaacgcggaggagtacatcgag tacctgcggtcagtgaaccgcctggacgaggccgcggttcgcctggccgccatcgtcaac gacgagaccttcgtctccaaggaggggaagtccaactaccagctgtggcacgagatgtgt gacctgatctcccagaaccccgacaaggtgaagtccctgaacgtgggcgccatcatccgc ggggggctgacgcgcttcacggaccagctgggcaagctgtggtgctccctggcggactac tacatccggagcgggcacttcgagaaggcgcgcgacatgtacgaggagtctatccagacc gtggtgacggtgcgggacttcacgcaggtgttcgacagttacgcccagtttgaggagagc atgatcgctgccaagatggagaccaactccgagatggggcaggacgaggaagacgacatc gacctggagctgcggctggcgcgtttcgagcagctcatcaaccggcgccccctgctgctc aacagcgtgctgctgcggcagaacccgcacaacgtgcacgagtggcacaagagggtgaag ctgtacgagggcaagccgcgagagatcatcaacacctacacggaggcggtgcagacggtc gaccccatgaaggccaccgggaagccacacatgctctgggtgtctttcgccaagttctac gaggagaacgagcagctcgacgacgcacggaccatctttgagaaggccaccaaggtgaac tacaagcaggtggacgacctggccagcgtctggtgtgagtacggggagatggagctccgg cacgagaactacgaccaggcactgcgcatcctgaggaaagccacagccattccatcgaag aaagcagaatactttgatgcatccgaaccggtccagaaccgggtctacaagtctctaaag gtgtggtccatgctggcggatttggaggagagcctggggacatttcagtccaccaaggcg gtgtacgaccgcatcattgacctgcggatcgccacgccccagatcatcatcaactactcc atgttcttggaggagcacaactacttcgaggagagcttcaaggcctacgagcggggcatt gccctcttcaagtggcccaacgtgtacgacatctggaacacctacctgaccaagttcatt gaccgctacgggggcaagaagctggagagagccagggacctgttcgagcaggcccttgac ggctgtccggccaagtacgcgaaaaccatctacctgctgtacgccaagctggaggaggag tacggcctggcgcgccacgccatggccgtgtacgagcgcgccacgcaggccgtggaggtc ggcgagcagtacgagatgttcaacatctacatcaagagggcggccgagatctacggggtc acacacacgcgcagcatctaccagaaggccatcgaggtgctgcctgatgaacactcacgc gagatgtgtctacgcttcgctgacatggagtgcaagctgggggagattgaccgcgccaga gccatttactcatactgctctcagatctgtgaccctcgggttagtatcttctacttcacc tggggcacatggagacacttgagttag

DBGET integrated database retrieval system