Lepisosteus oculatus (spotted gar): 102698016
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Entry
102698016 CDS
T07349
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102698016 (fbxo18)
Enzymes [BR:
loc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102698016 (fbxo18)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102698016 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
F-box
Viral_helicase1
AAA_30
DUF3310
AAA_12
ResIII
Motif
Other DBs
NCBI-GeneID:
102698016
NCBI-ProteinID:
XP_015207870
Ensembl:
ENSLOCG00000015655
LinkDB
All DBs
Position
LG8:12812577..12834771
Genome browser
AA seq
1036 aa
AA seq
DB search
MKHHGNGNQSLFCSELGKAKRRHLSAYDCAVLERSLQGSLSLTRPFSTPHTSKALHRGLY
PRKGVNDHLKQRGIKDFFRVTGVSPRKMAKGVKTEEGCGGDFAAEDDVLNFNPGDVVMED
FKEEPGFREADLRQGLKRSSECLGGDSAGCSSWARQPGADRVKKEDEEIPVDSLPDVHYG
LLGSTEGKQEPSGHIGHLPEEILTVIFSHLPAEDLYRHISLVCQRWRAIVHDPLFVPWKK
LYYQYRKGMCQAVEEVKAILTEDHITTDENSCLVNLVKYMSRFKHRRSAQPASVQKCLKA
HPLYAQAEACMKARTPELKQIDGAVNAWAAMALIVLLAHGVKHLQAMVSCLRSPASTLSL
SEISEFLYCMATLLLAMRENGISISNRLHYNVFYVLHLLENCPTRPGEAGQRGESGSQTL
YQPGVTPMAEIRVTHEQQQILNHDIDSRHVVKIMAFAGTGKTSTLIEYAKQRPLLRFLYA
AFNKSVATQASQVFTSNVDCKTIHSLAFREVGSKYHKLKKLNPYSLNPFTVAWILPKGRG
GFVRAKLVTQTLKTFFASADDTITVDHVPMRYKNTNGQYAFVEHEEKLKIVHDTDGIWER
MKELKGTREQGHYMTHDGYLKLWQLQRPRLYRYDAIFIDEAQDCTPAIMDIVLSQPCGKI
LVGDPHQQIYTFRGAVNALNEVPHTHIYYLTQSFRFGPEIAYIGATILDICKKVKKTLVG
GNQEGSVTGTTAGKVAILSRSNTMVFDEAVRVTECNPPPKIHIVGGVDNFGLRKILDIWI
LLQPEEERKQKNLEIVDKFIRNFCRSSLRGYKGLKEYASTAEDGELEGKITMVEKYNHRI
PELVNRIENCSVSDPASADFILGTVHKAKGLEFDTVVVTDDFIKVPCARHNLQRLPRFGD
GSVPDDEWNLLYVAVTRARKNLVMTKSLENILTLAGEYFLRSEMTSNLVTDGQLPLCAVR
DCQNPVREEAVLTMQKIPIKYGDRVDAGGPFCTTCVDQRLGPMTYLIGPPELTTLMPYTE
ERVALPVNIALLLALF
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccatggaaacggcaatcagagtttgttttgctctgagctagggaaggccaaa
agaaggcacttgagtgcttatgactgtgcagtccttgagcgtagcctgcaggggagtctg
tcccttaccaggcccttcagcacacctcataccagcaaggctctccacaggggactttac
ccaaggaaaggtgtaaatgaccatttgaagcagaggggcatcaaagacttcttccgggtg
acaggggtcagtcctcgtaagatggccaaaggagtgaagacagaggagggctgcggcggc
gatttcgccgcggaggacgacgtgttgaatttcaaccctggggatgtcgtcatggaggac
tttaaagaagagccgggtttcagggaggccgatctgagacagggcctgaagcgctcgtca
gagtgcctgggcggcgacagtgcagggtgcagcagctgggcgcgacagccgggggctgac
cgtgtgaaaaaagaggacgaggaaatacctgtggattcgctccctgacgttcattacgga
ctcctggggagcaccgagggcaagcaggagccttctggacacattggccatctgcctgag
gagatcctcaccgtcatcttcagccacctgccagcggaggacctgtaccgccacatcagc
ctcgtctgccagcgctggagggccatagttcacgaccctctgtttgtaccctggaaaaag
ctgtactaccagtacagaaaggggatgtgtcaggctgtggaggaggttaaggcaatcctc
actgaggatcacatcacaaccgatgagaactcatgtctggtgaatctggtaaaatacatg
tccaggtttaagcacaggcgaagtgcacagccagcaagcgtacagaagtgtttgaaagct
catcccttatatgctcaggctgaagcatgtatgaaggccaggacacctgaattaaaacaa
atcgatggggctgtgaacgcctgggcggccatggctctcatcgttcttctggctcacggc
gtgaagcatctgcaggccatggtgtcctgcctgaggagcccagcgtccaccctttccctc
tccgagatctcggagtttctgtactgcatggccacgctgctcctggccatgagggagaat
gggatcagcatcagcaacaggctgcattacaacgtgttttacgttctgcacctgttggag
aattgtcctacgcgccctggggaagccggacagagaggggaatctggcagccaaacgctg
tatcagcctggagtcactcccatggcagaaatcagagtaacccatgaacagcagcagatc
ctgaatcatgacattgattctagacacgttgtcaaaattatggcatttgcaggcactgga
aagacgtccacactgatagagtacgccaagcagaggccacttctgcgttttttgtatgca
gctttcaacaagtctgtagccacgcaagcctctcaggtcttcactagcaatgtggactgc
aagaccatccactccctggccttcagagaagtcggatccaaatatcacaagctgaagaaa
ctgaacccatacagtctgaacccgttcactgtggcctggattctgcctaaaggcaggggt
gggtttgtgcgagccaagctcgtaacccagactcttaaaactttcttcgcctctgctgat
gacaccataactgtggatcatgtcccaatgcggtacaaaaacacaaatggacaatatgct
tttgtggagcatgaagagaaattgaaaattgtccacgataccgatggcatctgggagagg
atgaaggagttgaaaggaacaagggaacaaggccactacatgacacacgatggatacttg
aagctttggcagcttcaaagacctcggctctacagatatgatgctattttcattgatgaa
gctcaagattgcactccagcaatcatggacatagttttgtctcagccctgtggaaaaata
ctggtaggagaccctcatcagcagatctacacgttcagaggtgctgtcaatgccttgaat
gaagtaccacacacgcacatttactacctaacacagagcttcagatttggcccagaaatt
gcttacattggagccacgatattagacatttgcaaaaaggtgaagaaaacgcttgttggt
ggaaatcaagaagggagtgttactggaaccacagcgggaaaggttgcaattctatcccgt
tcaaatacaatggtgtttgatgaggctgtgagagtaactgagtgtaatccgcccccgaaa
attcacattgttggtggtgtggataattttggattaagaaagattttagacatctggatt
cttttgcagcctgaggaggaacgtaagcaaaaaaacttggaaatagttgacaagtttatc
cgaaatttttgccgcagctcacttcgtggttacaaaggcctgaaggagtatgcttccaca
gctgaagatggagaactggaaggaaagattactatggttgagaaatacaatcaccgtatt
cccgaattagtgaataggatagagaattgctctgtctcagacccagcctctgcagatttt
attctgggaacagttcacaaagccaaaggactagaatttgacacagtggtagtcacagat
gacttcatcaaagtcccctgcgccagacataatcttcagcgtctgccaagatttggagat
ggatctgttcctgatgatgagtggaacctgctgtacgtagctgtgacacgggcccgaaaa
aacctagtgatgactaaatctttagaaaatatcctcaccctggctggggaatacttctta
cgctccgaaatgactagtaacctcgtcacagacggccaactccctctgtgtgctgtccgg
gactgtcagaacccagtgagagaagaagctgtccttacgatgcagaaaatcccgattaaa
tatggtgacagagtggatgcaggagggcccttctgcactacgtgtgttgaccagcgtctg
gggccaatgacttacttgatcggtccccccgagctcacgacattgatgccctatacagag
gagcgtgtggccctaccagtgaacatcgccttgttgcttgctctgttttaa
DBGET
integrated database retrieval system
