Lepisosteus oculatus (spotted gar): 102698067
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Entry
102698067 CDS
T07349
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
loc03110
]
102698067 (clpb)
Chaperones and folding catalysts [BR:
loc03110
]
Heat shock proteins
HSP100
102698067 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_5
Ank_3
Ank_4
AAA_5
ClpB_D2-small
AAA
Zeta_toxin
Sigma54_activat
AAA_22
Torsin
AAA_24
AAA_16
AAA_3
nSTAND3
NACHT
ATPase_2
YchF-GTPase_C
ABC_tran
RuvB_N
KAP_NTPase
AAA_14
RNA_helicase
SRP54
Motif
Other DBs
NCBI-GeneID:
102698067
NCBI-ProteinID:
XP_006627905
Ensembl:
ENSLOCG00000007715
LinkDB
All DBs
Position
LG3:12539553..12587019
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AA seq
682 aa
AA seq
DB search
MMLRFIGMGMFSVSRPMLVRCRRCCELLSPQMGMFNATRLNRTASGSEKHRCCDTDHSFA
TLTSSPSRETMLNSDWKLRNVRMRLQDQIPATRWIANLSIRQASYLCVHRGRCDHRSQEG
RGVPLWKLTPAVISMAALAYCLKRGSDPKGDSLLEAARSNNVQEVTRLLAEGIDPNYRHP
LGWTALMVAAMCHHHNVVKALLAAGADPNLGDEFSTVYDTAREKGIHSLEVLVTREDEFS
SRLNSRASFRGCSALHYAVLADDLRTVKILLEAGANPLLPNEIGHTPPAYAKEGEMAKLL
KDWEGKFQEAQQRREAEERRRFPLERRLREHIIGQEGAINTVAAAIRRKENGWYDEEHPL
VFLFLGSSGIGKTELAKQVARYMHKDVKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEE
GGQLTKQLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTS
NVASDEIAHHALQLRREAQEVSRRRLAGNLDDVQVSDKITISKQFKENVIRPILKAHFRR
DEFLGRINEIVYFLPFCHSELIQLVSKELSFWAKKAKQRHNITLLWDQEVMDLLAGGYNL
HYGARSIKHEVERRVVNQLAAAYEQELLPRGCTLRLSVDSSVESGSEGRGPSLRLEIVGD
DSTSKKLDIRPPLNPEELAFSL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatgttacgtttcataggcatggggatgttctcggtttctaggccgatgctggtcaga
tgccgaaggtgttgtgaacttctctctcctcagatgggaatgtttaatgcgacgagactg
aacagaactgcttctgggagcgaaaaacatcgctgttgcgacactgatcacagctttgcc
actctgacgtccagcccgtcaagggagaccatgctgaatagcgactggaaactcagaaat
gtcagaatgcgtctgcaggatcagataccggccacaaggtggatcgcaaaccttagtatc
aggcaggcctcgtatttgtgtgtccacagagggcgctgcgaccaccgctctcaggaaggg
agaggagttcccctgtggaaactcacgccggctgtgatctcaatggcggcgcttgcgtac
tgccttaaaaggggttccgatccaaaaggagactctttgctggaagcagccagatccaat
aatgtccaggaagtcacaaggctgctggctgaagggatcgaccccaactaccggcaccca
ctgggctggactgcgctgatggtggcagccatgtgccatcaccacaatgtggtgaaggcg
ctgttagctgcaggtgcagatccaaacctgggtgatgagttcagcaccgtctatgacacc
gcaagggagaaaggaatccattctctggaagtgctggtgacccgtgaggacgagtttagt
agccgactcaatagccgcgccagtttccgcggctgcagcgccctgcactacgccgtgctg
gccgacgacctgcggactgtaaagatcctcctggaggcaggtgccaaccccctgctgccc
aatgagatagggcacacgccacccgcctacgccaaggagggggagatggcaaagctgctg
aaggactgggaaggcaagtttcaggaggctcagcagcggcgggaagccgaggagcggaga
cggttccccctggagcggagactgagagagcacatcattggacaggaaggggccatcaac
actgttgccgcagcaattcggaggaaggaaaatggctggtacgacgaagagcatcccctt
gtcttcctcttcctgggctcatctggaattggtaaaacagagctagccaaacaagtggcc
cgatacatgcacaaagacgtcaagaagggtttcatccgaatggacatgtcagagtttcaa
gagaaacatgaggtggccaagttcataggctctccccccggctatgtgggccatgaggaa
ggtggtcagctgaccaagcagctcaagcagtgtcccaatgcggtggtgctgtttgacgag
gtggacaaagcccatcctgatgtgctcaccatcatgctgcagctctttgatgagggaagg
ctgaccgatgggaaagggaagacaattgaatgcaaagacgctatcttcattatgacatcc
aacgtggcgagcgatgagattgcccaccatgctctgcagctcagacgtgaagcccaggaa
gtgagccgaaggaggcttgcagggaatcttgatgatgttcaagtaagtgacaaaatcacc
atatccaagcagttcaaggagaatgtcattcgccctattttgaaggcacatttcaggcgg
gacgagtttctgggtcggatcaatgagattgtttacttcctgcctttctgccactccgag
ctcatccagttggtcagcaaggagctcagcttctgggcaaagaaggccaaacagagacac
aacatcactctgctgtgggaccaggaggtgatggatcttctggcaggagggtacaacctg
cactacggagcccgctccattaaacacgaggtggagcgccgagtggtgaaccagttagcc
gcggcctacgaacaggagctgctcccgcggggctgcacactacgtctctctgtggacagc
tctgtggagagtggctctgagggccggggccccagcctgcgcctggaaatagtgggagac
gacagcacttccaaaaaactggacatccgaccccctcttaacccagaggagctggctttc
tctctgtga
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