Lepisosteus oculatus (spotted gar): 102698193
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Entry
102698193 CDS
T07349
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
loc04990
]
102698193 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
loc04990
]
Other domain-containing proteins
Patched domain-containing proteins
102698193 (ptchd1)
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
102698193
NCBI-ProteinID:
XP_006627814
Ensembl:
ENSLOCG00000003811
UniProt:
W5M840
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All DBs
Position
LG3:4929666..4952904
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AA seq
886 aa
AA seq
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MLRQVLHEGLRTSFSKLGHFVANHPVFFASAPVLISILLGSSFSHYRVEENVEYLLAPKH
SLAKIEGNLVDSLFPVNRSKHTLYSDLQTPGRYGRVIVTSSARGSILDQHHVDLILKLHG
LVTKIQVHMNGFNYTFAHMCILDDNKSCIVDDILRVLEELRAARFANRTGGAVRYPITYL
RDGREVYIGHQLGGVQSPGKVQVKHAEAVQLTYYLQAVNSLNDVVAAKWETKFCETVERF
QQANGELKMYPFTSSSLQGDFQKTSKVSERPLITSLALCVALAVLFCSMRDCVRTKPWLG
LLAVVTMSLAMLTSAGIINLTGGKYNSTFLGIPFIVLGHGLCGTFEMLSSWRRTREDQHV
KERAAAVFADCMLPFTASTAMYMVTFGIGASPFTNIEAVRVFCRNTCISVFFNYLYILTF
YGSNLVFTGYLENNYQHNIFCKKVPKPELLQQKPAWYRFLMYTQYNEEGAESADMNAYEG
HLLVSFMKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNVVATETSTIA
YTTAQQKYFSNYSPVIGFYIYESIEYWNASVQEDVLEYTKGFVRISWFESYLNYLRKLNM
TTGLPKRNFTELLRNAFLKLPQFCHFSDDIIFARRAGGEVDVVASRMFLVAKTTENKREE
MYILLDTLRKLSLTSKVKFIIFNPSFVYMDRYASSLGAPLKNSCISALFLLFFSAFLVAD
SLINIWVTLVVVSVEFGVIGFITLWKVELDCISMLCLIYGLNYTIDSCAPLISTFVLGRD
FTRTKWVKITLERHGVSMLQSYLCYTASLLPLAAVPSNLTRTLFRCLFLTAFISFFHCLA
ILPIMLTFLPPSKKKRKEKKPAENREEIECVEIVDSTRVVDQITTV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggttttgcacgaaggactgaggacgtctttctccaagctcggccacttc
gtcgccaaccacccggtgttcttcgcctccgctcccgtcctcatctccatcctgctgggg
tctagtttcagccattatcgggtcgaggagaacgtggagtacctgttggctcccaagcac
agcttggctaaaatcgagggcaacttagtggatagcttattccccgtcaacagatcgaaa
cacacgctgtattcggacttgcagacccccggcaggtacggcagggtcatcgtcacctcc
tccgccagaggaagcatcttggatcagcaccacgttgacctcattttaaagctgcacggc
ctggtgaccaagatccaggttcacatgaacggcttcaactacactttcgcccacatgtgc
atcctggacgacaacaagagctgcatcgtggacgacatcctgcgcgtgctggaggagctg
cgggccgcgcgcttcgccaaccgcaccgggggcgccgtccgctaccccatcacctacctg
agggacggccgcgaggtctacatcggccaccagctcggcggggtccagtcgcctggcaaa
gttcaggtgaagcacgccgaggccgtgcagctcacctactacctgcaggccgtcaactcc
ctgaacgacgtggtggcggccaagtgggagacgaagttctgcgagacggtggagaggttc
cagcaagccaacggcgagctgaagatgtaccccttcacctcctcgtcgctccagggggac
ttccaaaagaccagcaaggtttcggagcgccccctcatcaccagcctggcgctgtgcgtg
gcgctggctgtgctcttctgctccatgcgggactgcgtgcgcaccaagccctggctgggc
ctcctggctgtggtcaccatgagcctggccatgctgacctcagcgggcatcatcaacctg
accgggggcaagtacaactccaccttcctggggatccctttcatcgtactgggtcacggc
ctgtgcgggaccttcgagatgctgtcgtcgtggcggcggacgcgggaggaccagcacgtg
aaggagcgggcggccgcggtgttcgccgactgcatgctgcccttcaccgccagcacggcg
atgtacatggtgaccttcggcatcggcgccagccccttcaccaacatcgaggccgtgcgg
gtcttctgccgcaacacctgcatctccgtcttcttcaactacctctatatactcaccttc
tacggctccaacctggtgtttactggctacctggagaacaactaccagcacaacattttt
tgcaaaaaggtgccaaagccagagctgctgcagcagaagccagcctggtacagattcctc
atgtacacccagtataacgaggagggggccgagtctgcggacatgaacgcctacgagggc
cacctgctggtctccttcatgaagcgctactactgcgactggatcaccaacacctacgtc
aagcccttcgtggtcctcttttacctggtgtatatctcgtttgccttaatgggctacctg
caggtcagcgagggttccgacctcagcaacgtggtcgccacggagacgagcaccatcgcc
tacaccacggcgcaacagaagtacttcagcaactacagccccgtcatcggcttctacata
tacgagtccattgagtactggaacgccagcgtgcaggaggacgtcttggagtacaccaag
ggcttcgtgaggatctcctggttcgagagctacctgaactacctgcgcaagctcaacatg
accacaggcctgcccaagaggaacttcacggagctgctccggaacgccttcctcaagctg
ccgcagttctgccacttctccgacgacatcatcttcgccaggcgggcgggcggggaggtg
gacgtggtggcctcgcgcatgttcctggtggccaagaccacggagaacaagcgggaggag
atgtacatcctcctggacacgctgcgcaagctctcgctcacctccaaggtcaagttcatc
atcttcaacccgtccttcgtctacatggaccgctacgcctcctctctgggggccccgctg
aagaactcctgcatcagcgccctcttcctcctcttcttctccgccttcctggtggctgat
tccctcatcaacatctgggtcaccctcgtggtggtgtccgtagagtttggggtcatcggg
ttcataaccctgtggaaggtggagctggactgcatctcaatgctctgcctgatatacgga
ctgaactacaccatagacagctgtgccccgctcatctccacctttgtgctgggtagggac
ttcaccaggactaagtgggtgaagatcaccctggagcgccatggggtctccatgctgcag
agctacctgtgctacactgccagcctccttcccctggcagcagtgccttccaacctgacc
cgcacactgttcaggtgcctgtttctcactgccttcatctctttctttcactgcctggcc
atcctgcccatcatgctcaccttcctgcctccctccaagaagaagaggaaagagaagaag
ccggccgagaaccgggaggagatcgagtgcgttgaaatagtggacagcacgcgggtggtg
gaccagatcaccacggtctga
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