Lepisosteus oculatus (spotted gar): 102698587
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Entry
102698587 CDS
T07349
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04140
Autophagy - animal
loc04148
Efferocytosis
loc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102698587 (vps11)
04148 Efferocytosis
102698587 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102698587 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102698587 (vps11)
Membrane trafficking [BR:
loc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102698587 (vps11)
Hops complex
102698587 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
VPS11_C
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3HC4
zf-C3H2C3
zf-ANAPC11
zf-RING_5
ADIP
zf-RING-like
zf-RING_UBOX
zf-C3HC4_3
Mut7-C
Motif
Other DBs
NCBI-GeneID:
102698587
NCBI-ProteinID:
XP_006642339
Ensembl:
ENSLOCG00000005692
LinkDB
All DBs
Position
LG26:9441356..9452957
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AA seq
926 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDPADNGKNFALPVGICACDSGRGHIVLGDLEGQIWFLTRSL
QLTSFQAYKLQVTHLYQLKQHSILVSVGLDEHGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTCPITGLAFR
QAGKVTHLFVATLEKVQCYTLSVKEYPHLELDTHGCALRCAALTDPSQDSQFIVAGDECV
YLYQPDERGPCFAFEGHKLLVHWHRGYLVLLTRDAKSPNKPEFPSREASPTEKQVLTVYD
LDNKFIAYSAAFNDIVDVLAEWGSLYILTQDRKMYVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSHHLDSDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHEHHEWYLKIQLEDLKNYQEALRYIGRLPFEQAESNMKRYGKTLMHHV
PEETTLLLKGLCTDYQPRRDSADRDSLGSKANSEEFIPIFANNPHELRAFLEHMIEVEPR
SPQGVYDTLLELRLQDWAHEQDPQKKSALQDAALCLLKSDYTVFDKALVLCQMHNFKEGV
LYLYEKGKLYQQIMHYHMQNEEYAKVVEACKRYGEQEACLWEQALGYFARKEEDCKTYIS
QVLHHIDRNNLMPPLLVVQTLAHNSSATLSVIKDYLISKLQRESEQIEDDERKIRQYRED
TAQLRTEIQELKNSAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCFESYAESEAECPT
CTPDNRKVMDMLRAQDQKRDLHENFARQLRCSNDGFSVVADYFGRGVFNKLTLITDLPGG
KPGGSGGGGLEADLQRDLLIHTKRNA
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttgcagtggcgaagatttgtatttttcgataaagaaacggtgaaggat
cctgcggacaatgggaaaaatttcgcgctcccggtcggtatctgtgcctgcgactcgggc
cgaggtcacatcgtgctgggagatctggagggtcagatctggttcctgacacgctccctg
cagctaacgtcctttcaggcatacaaactacaagtgactcacctctaccagctgaaacag
cacagcatcctggtgtcagtgggattggacgagcacggaatcaacccactggtcaaggtg
tggaacctggacaagcgcgacagtgggaaccctctctgcactcggatcttcccggccatc
ccagggaacaaacccacagaggtgtcctgcctcagcgtgcacgagaacctcaacttcatg
gccatcggcttcacagacggcagcgtggttctgaccaagggcgacatcaccagagatcgc
cacagcaaaaccctcaccctgcacgagggcacctgccccatcaccgggcttgctttccgg
caggcgggcaaagtcacgcacctgtttgtcgccaccctggagaaagtccagtgctacacc
ctctccgtgaaggagtacccgcacctggagctggacacacacggctgtgccctgcgctgc
gccgcgctgaccgacccctcccaggactcccagttcatcgtggcgggtgacgagtgtgtg
tacctctaccagcccgacgagaggggcccctgcttcgccttcgaggggcacaagctgctg
gtgcactggcaccgcgggtatctggtgctgctcacacgcgacgccaagtcgccgaacaag
cccgagtttccgagccgggaggcctcccccacagagaagcaggtcctgaccgtctacgac
ttggacaacaagttcattgcgtacagcgctgcgttcaacgacatcgtcgatgtgctggcg
gagtggggctcgctgtacatcctgacccaggaccgcaagatgtatgtgctgcaggagaaa
gacactcagaccaagctggagatgctcttcaagaagaacctgtttgtaatggccattaac
ctggccaagagccaccacctagacagcgacgggctgtccgagatcttccgtcagtatggg
gaccacctgtatgtcaagggagaccacgatggagccattcagcagtacatccgcaccatt
gggaagctggagccctcctatgtgattcggaagttcttggatgctcagaggatccacaac
ctgacagcatacctgcaggccctgcacaggcagtccctggcaaatgctgaccacaccacc
ctgctgctcaactgctacaccaagctgaaggacagctccaaactggaggagttcatcaag
agcagcgagagtgaggtgcatttcgacgtggagatcgccattaaggttctccggcaggcc
ggctaccacagccatgcggtcttcctggcggagaagcacgaacaccatgagtggtacctc
aagatccagcttgaagacctcaagaactaccaggaggccctgcggtacatcgggcggctg
cccttcgagcaggcggagagcaacatgaagcgctatgggaagacgctgatgcaccacgtc
cccgaggagaccaccctgctgctgaagggtctgtgtaccgactaccagccacgccgggac
tccgccgacagagacagcctgggcagcaaggcgaactcggaggagttcatccccatcttc
gccaacaaccctcacgagctgcgggccttcctggagcacatgatcgaagtggagccacgg
tctccccagggggtctatgacaccctgctggagctccggctgcaggactgggcacatgag
caagacccgcagaagaagagcgctctgcaggacgctgcgctgtgtttgttgaagagtgac
tatacggtgtttgacaaggctcttgtcctgtgccagatgcacaacttcaaggagggggtg
ctgtatctgtacgagaagggcaaactctaccagcagatcatgcattaccacatgcagaat
gaagagtatgcgaaggtggtggaggcctgcaaacgctatggggagcaggaggcctgcctg
tgggagcaggccctggggtacttcgcacgcaaagaggaggactgcaagacctacatcagc
caagtgctgcatcacatcgaccgcaataacctcatgcctccgctgttagtggtccagacc
ctggcgcacaactcctcggcgacgctgtcggtgatcaaggactacctcatcagcaagctg
cagcgggagagcgagcagatcgaggacgacgagaggaagatccgccagtaccgcgaggac
accgcgcagctgcgcacggagatccaggagctgaagaacagcgccaagatattccagaag
acgaagtgcagcatgtgcaacagcccgctggagctgcccagcgtgcacttcctgtgcggc
cactccttccaccagcactgcttcgagagctacgccgagagcgaggccgagtgccccacc
tgcacccccgacaaccgcaaggtgatggacatgctgcgcgcccaggaccagaaacgggac
ctgcacgagaacttcgccagacagctgcgctgctcgaacgacggcttctcggtggtggcg
gactacttcggccggggggtgttcaacaagctgacgctgatcaccgacctgcccgggggg
aagcctgggggcagcggcggcggcgggctggaggccgacctgcagcgagacctgctcatc
cacaccaagaggaacgcctga
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