Lepisosteus oculatus (spotted gar): 102698664
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Entry
102698664 CDS
T07349
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04620
Toll-like receptor signaling pathway
loc04621
NOD-like receptor signaling pathway
loc04622
RIG-I-like receptor signaling pathway
loc04623
Cytosolic DNA-sensing pathway
loc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102698664 (irf7)
04621 NOD-like receptor signaling pathway
102698664 (irf7)
04622 RIG-I-like receptor signaling pathway
102698664 (irf7)
04623 Cytosolic DNA-sensing pathway
102698664 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102698664 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102698664 (irf7)
Transcription factors [BR:
loc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102698664 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102698664
NCBI-ProteinID:
XP_015193511
Ensembl:
ENSLOCG00000000378
LinkDB
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Position
LG27:6306..16585
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AA seq
454 aa
AA seq
DB search
MQSSVSYNKPQFGQWLIQQINSGDYPGLCWVDNDKFRVPWKHNSRKDCNDEDNKIFWVWA
WRLASVLLAWAYASGKITENPNDKAKWKTNFRCALHSLKYFRKIEDHSKESDDPHKVYQI
IRNFAADIESDQNEHLNIKPSYCPIQNMHLNEAPKYTETQPQDLSNQLFTLNLDNQHAEN
IPLEESSGCHIPAEMHNVYHIESMSTEPQITSQKFADHFPVHSYITAVNQPPIHLQNQPY
VNDLEITIFYRKKTVLTTRVCSPRVQLHYHSENPALGAGQAVCFPGTEQLVDHKQIEYTN
QILNSIQSGLLLEVKPTGIYGTRQDKCHVYSIASDAIPNTPVNVEPHKLPQNREVELLSF
QKYTNELKEFKENKRGSPEYTIYLCFGEKFPDGKPREKKLIIVKVLPLICKYFHEVAQHE
GATSIHNDSISLQFSHNSLYDLIGSVFDLPMAFS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagcgtcagctacaataagccccagtttgggcaatggcttatccagcagatc
aacagtggtgactatccaggcctctgctgggtggacaatgataagttccgagttccttgg
aagcacaactccaggaaagattgcaatgatgaagacaacaaaatattctgggtatgggcc
tggaggcttgcatcagtattgctggcctgggcatacgccagtggcaaaatcacagaaaac
ccaaacgacaaggccaagtggaaaacaaacttccgatgtgccttgcatagcctgaagtac
ttcagaaaaatagaagaccactccaaagagtctgatgacccccacaaagtttaccagatc
atacgcaactttgcagccgacattgagagtgatcagaatgagcacctgaacataaagccc
agctattgcccaatccagaatatgcatcttaatgaagctcctaaatacacagaaacacag
ccacaggacctgtcgaatcagctcttcacccttaatctggacaaccagcatgcagaaaat
atcccattggaagaatcttctggatgccatattcctgctgagatgcataatgtctatcac
attgagtccatgagcactgaaccccagatcacctcccagaaatttgccgatcatttccca
gtgcattcctacattactgcagtgaaccagcctcccatccacctccagaaccagccttat
gtgaatgatctggagattaccatcttctacaggaagaagactgttctcaccacccgggtg
tgcagtcccagggtacagctccattaccacagtgagaaccccgcactgggtgctgggcag
gccgtgtgcttcccgggcactgaacagctagtcgaccacaagcaaattgagtacaccaac
cagatcctcaacagcattcagagtgggctgctcctggaggtcaagccaactggcatctat
ggtacacgccaggacaagtgtcacgtgtacagcatcgcctctgatgccatccccaacact
cctgtcaatgtggaaccccacaaactaccccagaacagggaagtggagctcctcagcttt
caaaagtacactaatgaactgaaggagtttaaagaaaacaagcgtggatccccagaatac
acaatctacctttgctttggagaaaaattcccagatggaaaacccagagagaagaaatta
attatagtaaaggttctgcctctgatctgcaagtatttccatgaagtggctcagcatgag
ggggcaacttccatccacaatgacagcatcagccttcagttctcacacaacagtctatac
gacctcatcggctctgtgtttgacctccctatggctttttcctga
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