Lepisosteus oculatus (spotted gar): 102698745
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Entry
102698745 CDS
T07349
Symbol
aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102698745 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102698745 (aaas)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102698745 (aaas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
PD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
102698745
NCBI-ProteinID:
XP_006629431
Ensembl:
ENSLOCG00000005559
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All DBs
Position
LG4:complement(14307384..14326168)
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AA seq
517 aa
AA seq
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MCSLALFPPPLPAGQVSLYESSNELVSGSTLDSYQRQEWDPPSLLIPKDTLKPHSRLECS
SKAAFIDHQEALWMRSANAWRDAGLMGLLDEIANSVDEVPRWMAVGSGCSLALLRWMSSF
HGSLFPHLALSSEDMVVEFSQVLDWANCSVRGFAWHPHTDKFAVALLDDSVRVYNAKSAT
SPTLKHRLQRNVAALAWKPLCASALAVACQNCVLVWHVDPTSLSTRPSSGCAQVLSHPGH
SPVTSLAWAPSGSVLLSASPVDTAMMVWDVAGESCVPLQRVGGGGVTFLSWSPDGSRVLA
STPSALFRVWETRMWTCDRWPCLKGRCQTGCWSPDGSRLLFCVQGEAVIYALTFTDAPGE
PLGGGGGSRAAAVVADLSETTFRTEDGELRVGGEVQAVAWDPRGERLAVLLKGDPEAVDH
PAFIAVFKTRTSPVFELLPCGFIQGEAGAEPRLIQFHPHFQKGALLTVCWSNGRISHVPF
YFMSARTPLLGLGGSPPLPLSRAVENGERPLYTELGS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccctggcgctctttcctccaccgctgccggctggccaggtctccctgtacgag
tccagcaacgagctggtgtccggcagcacgctggacagttaccagagacaggagtgggac
ccgccctccctgctcattcccaaggacacgctgaagccccacagccgcctggagtgcagc
agcaaggctgccttcatcgaccaccaggaggcgctgtggatgaggagtgccaatgcctgg
cgtgatgcggggctcatgggattgctggatgagatcgccaactccgttgatgaagtgccc
aggtggatggcggtgggatccggctgcagcctggcccttctgcgatggatgtcttccttc
catggctctctcttcccccatctcgctctgagcagtgaagacatggtagtggaattttcc
caggtgcttgattgggccaactgctcggtgcgtggatttgcctggcacccccacaccgat
aagtttgctgtggctctcttggatgactctgtcagggtgtacaacgccaagagcgccacg
tcgcccaccctgaagcaccgcctccagaggaatgtggctgccctggcgtggaagcccctg
tgcgcgtcggcgctggcggtggcctgtcagaactgcgtcctggtctggcatgtcgacccc
acctccctctcgaccaggccgtcctcgggctgcgcgcaggtgctgtctcacccaggacat
tctccagtgaccagcctggcctgggcgcccagcggctctgtgctgctctcggcctcccct
gtggacactgccatgatggtgtgggatgtggctggagagagctgtgtgcccctccagcgt
gtgggtggtggtggcgtcaccttcttgtcctggtcaccagatggcagcagagtcctggcc
tccactccttctgccctcttcagagtctgggagacgcgcatgtggacctgtgacaggtgg
ccctgtttgaaggggcgctgtcagacggggtgctggagtccggacgggagccgcctgttg
ttctgtgtgcagggagaggctgtgatctatgccctgaccttcacagacgccccaggggag
cccctgggagggggagggggctccagagccgctgccgtcgtggccgacctctccgagacc
acgttccggaccgaggatggggagctcagggttgggggagaagtccaggctgtggcatgg
gacccccggggggagaggttggccgtgcttctgaaaggtgacccagaggctgtggatcat
cccgccttcatcgctgtgtttaaaacacgcaccagtccagtctttgagctgcttccctgt
ggttttatccagggagaggcaggagcagagccccggctgatacagtttcaccctcatttc
cagaagggagccctactcactgtgtgctggtctaacgggaggatatctcatgtccccttc
tacttcatgagtgccaggacgcccctgctgggcctgggggggagcccgcccctgccctta
tccagagcggtggagaatggggagagaccactctacacggagctgggctcgtag
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