Lepisosteus oculatus (spotted gar): 102698977
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Entry
102698977 CDS
T07349
Symbol
gpc6
Name
(RefSeq) glypican-6 isoform X2
KO
K08112
glypican 6
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
loc00535
]
102698977 (gpc6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
loc00537
]
102698977 (gpc6)
Proteoglycans [BR:
loc00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
102698977 (gpc6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
loc00537
]
Others
102698977 (gpc6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
DUF5856
Motif
Other DBs
NCBI-GeneID:
102698977
NCBI-ProteinID:
XP_006639058
Ensembl:
ENSLOCG00000004830
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Position
LG17:12818219..13154244
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AA seq
552 aa
AA seq
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MFRIEAVFCTFSVLSLAVGADLKARSCSEVRQAYTAKGFSLVNVPHQEISGEHLRICPQG
HTCCTSEMEDKLSQQSKLEFENLVEETSHTLRTTFVSRHKKFDEFFLELLENTEKSLNDM
FVRTYGKLYMQNSEVFMDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLLNSQYHFT
DEYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLTVGREVANRVSKVSLTPG
CIRALMKMLYCPYCRGMPAAKPCDNYCLNVMKGCLANQADLDPEWNLFIDAMLLVAERLE
GPFNIESVMEPIDVKISEAIMNMQDNSVQVSSKVFQGCGQPKPSGLGRSTRGVPEVFNPR
FRPYSPEERPTTAAGTSLDRLVIDIKEKLKHSKKFWSTLPDSICVDDKVTAGKSNEEECW
NGHTKGRYFPEVLNNGLTNQMNNPEVEVDITRPDTFIRQQIMALRVMTNKLKNAYNGNDV
NFQDASDEGSGSGSGSGCTEACVTEFDFVSTEAPAVGADKSEEKASAIRPSYSLLLTLVL
TCTLFALQRQWR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatagaagccgttttttgcactttctcagtgctgtcacttgcagttggagct
gatcttaaagcacggagctgcagcgaggtcaggcaggcgtacactgctaaaggctttagc
cttgtcaatgtccctcatcaggaaatatcaggtgaacatctgcgcatctgtccccagggt
cacacatgctgcacttctgaaatggaagacaaattgagccaacagagtaaactggaattt
gaaaacctagtagaagaaacaagtcatacattgagaactacctttgtgtccagacataaa
aagtttgatgagtttttcctggagctcctggaaaacactgagaagtccctaaatgatatg
tttgtgcggacttacggcaagctctacatgcagaactctgaagtgttcatggacctcttc
actgagctgaagagatactacacaggcgggaatgtgaatctagaagagatgctgaatgat
ttctgggctcgactgctggagcgaatgtttcagcttttgaactcacagtatcatttcacg
gatgagtacttggaatgtattagcaaatacacggaccagctaaagccttttggagatgtg
cccagaaaactgaaggctcaggttactagagcatttattgcagctcgtacttttgtccag
gggctcactgtcggaagagaggtggccaacagagtgtccaaggtgagcctaaccccaggg
tgcatccgtgcactcatgaagatgctgtactgcccatactgtcgagggatgcctgcagca
aagccatgtgacaactactgcctgaatgtcatgaaaggatgccttgcaaaccaggctgat
cttgacccagaatggaatctcttcatagatgctatgttgctggtagcagaaaggttggag
ggaccattcaatattgagtctgtcatggagccaattgatgtcaagatttcagaagccatc
atgaatatgcaggacaacagtgtacaagtctcatcaaaggtttttcaaggatgtgggcag
cccaaaccatctggtttaggcagatcaactcgtggtgtcccagaggttttcaatcctcgt
ttcaggccgtacagtcctgaagaaaggcccaccacagctgccggaacgagccttgacaga
ctggtgattgacattaaagagaagctgaagcattctaagaagttctggtccactttacca
gacagtatatgtgtggatgacaaagtgacagctggcaagtcgaatgaagaggaatgctgg
aatggtcacacaaaggggaggtactttcccgaagttttaaacaatggtctcacaaaccaa
atgaacaacccggaagttgaggtggacatcacaagaccagataccttcattcgtcagcag
attatggcactacgagtaatgacaaacaagctgaaaaatgcatacaatgggaatgatgtc
aattttcaggatgcaagtgatgaaggcagtggttcaggaagtggcagtggctgtactgag
gcttgtgttacggagtttgactttgtcagtacagaagctcccgcagttggtgcagacaag
agtgaagagaaggcttcagccatcagaccaagctactctctactactgaccttagtcttg
acatgcacgctgtttgcactacagaggcaatggagataa
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