Lepisosteus oculatus (spotted gar): 102699013
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Entry
102699013 CDS
T07349
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04080
Neuroactive ligand-receptor interaction
loc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102699013 (gabra4)
04082 Neuroactive ligand signaling
102699013 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102699013 (gabra4)
Ion channels [BR:
loc04040
]
Ligand-gated channels
GABA-A
102699013 (gabra4)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102699013
NCBI-ProteinID:
XP_015200811
Ensembl:
ENSLOCG00000012374
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Position
LG4:54852248..54970303
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AA seq
592 aa
AA seq
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MVSAKKEMVIAMSSSYISTLIYFLCVTACIKKSSGQIRKDEKLYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYDGPIEILRLN
NLMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQNSVEVPEESSSLVQYDLIGQTVSSETVKSIT
GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNTQMEKAKKKQMKCPP
APKVTPIKKANDSEEVLQCLLIETPATGCAAVPGPFPPSKPRLLSFSVRILNPDTNGNLR
KRMNYMTQPDSNSDQRTDAGSNNKGGVSKQSLVGQVPSAALSSMCHSSPNPFSHSNITSA
TLLSRITPPAPPSTPTASTRITTNVFVGSASIQQLLGPKLEHIQMAGDKMEFNLKQASPT
PAAPASTPTASGTSKIDKYARILFPVSFGAFNMVYWVVYLSKDTMESTDGSA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgattgcgatgtcctccagttacatttccactctg
atttactttctctgcgtgacagcatgtataaagaaaagctctggacagatcagaaaggat
gagaaattatatcctgaaaatttcactcgcatactagatcgacttctggatggctatgac
aacaggctgcgacctggatttgggggtccagttacagaagttaaaacagatatttatgta
acaagctttggaccagtttctgatgttgaaatggaatatacaatggatgttttttttcgc
caaacatgggtagacaaaagattaaaatatgacggccccattgaaatcctaaggctaaac
aacttaatggtcacaaaagtgtggacacctgatactttctttagaaatggaaaaaaatct
gtctctcataacatgacagctccaaacaaattattcagaatcatgagaaatggtactatt
ctgtacactatgaggcttacaataagtgcagagtgcccaatgagacttgtggatttccca
atggatggacatgcttgccctcttaagtttggaagctatgcatatcccaaaactgaaatg
atctatacctggaccaaaggaccacaaaattcagtggaagttcctgaagaatcatcaagc
ttagtacaatatgatctgattggacagactgtttctagtgaaactgtgaaatcaattaca
ggtgaatatattgtgatgacagtttattttcatctgagacggaaaatgggctactttatg
attcagacatatattccatgcattatgacagtaatcctttctcaagtgtcattttggata
aataaagaatccgtccctgcaagaactgtatttgggataacaactgttctgacaatgaca
acattaagcataagtgcaaggcattctttaccaaaagtttcatatgccacagcaatggat
tggttcatagcggtatgctttgcctttgtgttctctgctctcattgagtttgctgctgtg
aactacttcacaaatacacaaatggagaaagcaaaaaagaagcaaatgaaatgtccacca
gcgcctaaagtaactccaataaagaaggcaaatgacagtgaagaagtgctacagtgcctc
ctcattgagacacctgcaacaggttgcgccgctgtcccgggaccttttcctcccagtaag
ccaaggctacttagcttctccgtcagaatactaaatcctgatacaaatggcaacttgaga
aaaagaatgaactacatgactcaaccagattctaacagtgaccaaagaactgatgctggc
agcaataacaaagggggagtttcaaaacaatccttagtgggccaagtaccttcagcagca
ttgtcctctatgtgtcattcaagtcccaatcctttcagtcactcaaatataacctcagct
acactgttatcaagaatcactccaccggcaccaccctcaactccaactgcatcaactcgt
atcacaactaatgtttttgtgggatctgcctctatacagcaattgcttgggcccaaactt
gagcacattcaaatggctggagacaaaatggagtttaatctaaaacaggcatcaccaacc
cccgcagctcctgcttctactcctactgcatctggaacaagtaaaatcgacaagtatgca
cgtattcttttcccagtttcctttggggcttttaacatggtttactgggtagtctactta
tcaaaagacaccatggagtcaacagatggatcagcctaa
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