Lepisosteus oculatus (spotted gar): 107075583
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Entry
107075583 CDS
T07349
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B-like isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04060
Cytokine-cytokine receptor interaction
loc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107075583
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107075583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
loc04050
]
107075583
04090 CD molecules [BR:
loc04090
]
107075583
Cytokine receptors [BR:
loc04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
107075583
CD molecules [BR:
loc04090
]
Proteins
107075583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
EphA2_TM
Protocadherin
Motif
Other DBs
NCBI-GeneID:
107075583
NCBI-ProteinID:
XP_015192688
Ensembl:
ENSLOCG00000004286
LinkDB
All DBs
Position
LG25:8340992..8366203
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AA seq
453 aa
AA seq
DB search
MFWKTLGLALAVTMLHVESQMYILPYPPDNRGHVCRNPEREYYRSMVHRCCSQCPPGTRL
IEDCTETKDTVCQKCRNGSYTDRWHYHNNCFRCTKACYQGLEEVQPCTVTSPRKCVCKGG
YCSFTSSSYSCDTCSMYSSCPPGQGVSEKGTANSDVVCSPCPPGTFSATDSSTEICQPHT
DCASHGTSELRAGTNSADAVCHPKMATTPPRAVAAETLGNSVLHRMDAPFSARPPSLPHS
VPTTVQADKTVAVIDKTNIIAGAVAGGAVLVTIIIVMFIIGRCIYNRTAALQENADAEAK
KVLNCTPGALQRNSSGNLHPPSQERLCLLGETESSQSELSSALGSQSGAETTTSSSQRGS
PSCCQGGDVHLPVPGQGQQGRPPSCAGSREGDVSTPSHARAVPGRQHEETRAASHVDHGE
IQTHGVNLTRANCSFSTGSVELRGELRGVRSLT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttttggaaaaccctgggtcttgcgcttgctgtcacgatgcttcatgtggagagccag
atgtacatcctgccctaccccccggacaacagaggacatgtctgccggaacccagagagg
gaatactatcgttctatggtgcaccgctgctgctcacagtgtccaccagggacccgtctg
attgaggattgcacagagacaaaggacacggtgtgtcaaaagtgtcggaacggctcctac
acagatcgctggcactaccacaacaactgcttcagatgcacaaaggcctgttatcaaggc
ctggaggaggtccaaccctgcacagtcacctccccgagaaagtgtgtctgcaagggaggc
tactgctcttttacctcaagcagctactcctgtgacacctgcagcatgtactccagctgc
ccgcctggccagggagtctcagagaaagggaccgcaaactctgatgtagtgtgctctccc
tgccctcctggtaccttctctgccacggactccagcacagagatctgtcagccccacact
gactgtgcctcacacgggaccagtgagctgcgcgccgggacaaacagtgcagacgccgtc
tgtcaccccaaaatggcaaccacacctcccagggctgtcgctgctgagactctcggcaac
tctgtcctgcacaggatggacgcccctttctctgcacggccaccttctctgcctcactct
gttcccaccacagtgcaggccgacaagaccgtagctgtcatcgacaagaccaacatcatc
gctggggcagtagctggcggtgcagtgctggtcactatcatcatagtgatgtttatcatt
ggacgctgcatctacaacagaactgcagcccttcaagagaatgccgatgcagaggccaag
aaggtcctgaactgtacccctggggccctacagcggaactcctccggcaacctccacccc
ccttcgcaggaacggctgtgcctgctgggagagacggaatccagccaatccgaactctcg
tcagccttgggcagccagtcgggcgcggagacgaccacatcgagcagccagagagggagc
cccagctgctgtcaaggaggagacgtccatctcccagtgccaggacaaggacaacaagga
cgcccgcccagctgtgcaggaagtcgggaaggcgatgtgagcacgccgagccatgcaagg
gcagtaccagggcggcaacatgaggagacaagagcagccagtcatgtggaccatggagag
atccaaactcatggcgttaatttaaccagggctaattgttctttttcaactggatcagta
gaactcagaggagaactcagaggagtacggtcattaacctag
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