Lepisosteus oculatus (spotted gar): 107076835
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Entry
107076835 CDS
T07349
Name
(RefSeq) PDZ domain-containing protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
107076835
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107076835
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107076835
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GFIT
Other DBs
NCBI-GeneID:
107076835
NCBI-ProteinID:
XP_015198000
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Position
LG3:32857467..32872319
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AA seq
657 aa
AA seq
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MGCRLSGLWLGDGLEINGQDFSQANQQEALRIFGCRHEPITLQIDGWKTHPQRRQTSDCS
TQTERPWDTLRGLGVTVGSSPRLSTYIDRPCCNHMTLPRDHYNAHEYLPSIPHDVETMDR
LGYKDPELYRYAPKGRGYLIGCCNTNMEDPNSFLNQTEEDEAVREKRPGFPPPLHELDSG
LGCTDGSFHQGELSGLETEEGAEEPGSSPLERTSQESPSSESLISSELSDSGFYSVSTGE
FRRFQRLLEKKIRLYRAKMASRGAGDGAKRDQAPLRDGFRTRYDLESIPEALTCQPRGGW
PQEASPTTVARRCMMGVSSVQYMKAESPRLSRYGSITSPRLSPKTGASPCGSPCSQNRAM
QEKDSLADVRGRGSQQGEPPSSERRQASHSAAQEYKTPPEQPHHRKPAQDSTHKPSQDDK
IKHSKVGCHSGSWPRGTAEDNRGILPGDICRRGLSDRLGPLECSKKTEKLASKGASARGD
GRCQTSYHTQQDCAAGSWPKAARGCSQKAGLHSTQEGDLPKSKKGLPNPRVLRNQLLKAR
ASRLADERGGVTTDEEMRSEVKMGRYWSKTERRRHLLTAREQRQRRLARGSGGEGARRKE
ASSVVLELSNRKRTQLRNRKLLDSWTTIEELLTHGTKTAVGTSEIMCPSPLLSVTTV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtcggctctctgggctctggctaggtgatggcttggagataaacgggcaggat
ttttctcaggccaaccagcaggaggcgctgaggatctttggctgccgccatgagccgatc
actcttcagatagatggctggaagacccaccctcagaggaggcagacatcagactgcagc
acccagacagagagaccctgggacaccctgagaggccttggggtcaccgtagggtcatca
cccaggctgagcacttatattgacaggccctgttgtaatcacatgaccctgccacgtgac
cactacaacgcccatgagtacctgcccagcattccccatgatgtagaaactatggaccgc
ctgggatacaaggaccctgagttgtacaggtacgcacctaaaggaaggggctatctgatt
ggctgttgcaacactaacatggaggatccaaacagcttcctgaaccagactgaagaggac
gaggcagtgcgagagaaacgaccagggttcccccctcccctgcacgagctggacagtggg
ctgggctgcactgacggcagcttccaccagggggagctgtcggggctggagacggaagag
ggggctgaggagccaggctcttccccgttggagcggaccagccaggagtcgccctcctcc
gagtccctcatctcctccgagctcagtgactccggcttctacagcgtcagcactggggag
ttccgccgcttccagcggctgctggaaaagaagattcgattgtaccgtgccaagatggcg
tccaggggcgctggcgacggggccaagagggatcaggcacctctgagggatggcttcagg
acacgctacgacttggagtccatccccgaggctctgacgtgccagccaaggggtgggtgg
ccacaagaagcaagccccaccactgtggctcgaaggtgcatgatgggggtgtcctctgtg
cagtacatgaaagcagagagccctcgcctgagcaggtacggctctatcaccagccccagg
ctttcccctaaaacaggggcctccccctgtggctccccctgcagccagaacagagctatg
caggaaaaggactcactagcagacgtgcgagggagaggcagccagcagggggagcccccg
agctcagaacgacggcaagcaagccactctgctgcgcaggagtacaaaactcctcccgag
cagccccatcacaggaaacctgcacaggacagcacccacaaaccaagccaggatgataaa
atcaaacacagcaaggtgggctgtcacagtggctcctggccaagaggcacggctgaagac
aacaggggaatacttccgggggacatttgtagacgtggtttgagcgacaggctgggccca
ctggaatgcagcaagaaaacggagaagctcgcaagcaagggggcttcagctcgtggggat
gggcgatgccaaacatcctatcacacccaacaagactgcgctgccggatcctggcccaag
gctgcaagaggctgtagccagaaagctggccttcacagcacccaggagggggacttacct
aagtcaaaaaaggggcttcccaaccctcgggtcctgaggaaccagctgctgaaggctcgg
gcctcgcggctggcagatgagcgaggcggggtgaccacagacgaggagatgcgcagcgag
gtgaagatggggcgctactggagcaaaacagagcgcaggaggcatctcctgacggccagg
gagcagaggcagaggcggctggcgagggggtcgggcggggagggggccaggaggaaggag
gcgtccagcgtggtgctggagcttagcaacaggaagcggacacagctccgcaacaggaag
ttactggacagttggaccacaattgaggagctgctgacccatggcaccaagacagctgtg
ggcaccagtgagatcatgtgtcccagccctctgctctctgtcaccaccgtgtaa
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