Lepisosteus oculatus (spotted gar): 107077421
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Entry
107077421 CDS
T07349
Symbol
ccdc36
Name
(RefSeq) coiled-coil domain-containing protein 36 isoform X1
KO
K26085
interactor of HORMAD1 protein 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
107077421 (ccdc36)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
107077421 (ccdc36)
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Gene cluster
GFIT
Motif
Pfam:
IHO1
Baculo_PEP_C
DUF7605
Motif
Other DBs
NCBI-GeneID:
107077421
NCBI-ProteinID:
XP_015203437
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Position
LG5:complement(40622420..40646505)
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AA seq
631 aa
AA seq
DB search
MNVNVLNVEEIFSIPGATRGNKLSFGRSGTHSGHSRMTDPMFLAGCRVRHSHSQDTYQEM
SQPSITALAFQHGSQEVNEPKGSAKYQTRPYNFGVDKWEKPIESQLGCGKAKGILGLFEE
SKKKAKEKDESELFNNRFSQLEESVDHIKISLNRIESQADSRKTFIAEGLDVCSKQLEDK
VRSICDPVLSELKSQSQVLAEMEKMETEMKSCMLALQDNVERMKMEHSKDNGKISEKLDL
LNSSLKFDELVSFLTNLASSYRPTCNVKDCTVQTSPRLCENFCLVSEEKTYFESTRVCKT
NTLQPSTALMPEELGNGTSTSEKESDEQCAKVSGTINEQAIFFLDEDRSMNTLKNRVDEN
PSLSSYYMHSTGAISGLSEPDNGLQTYFMKENEQHERKGHVQSSHISDTQNENNLYGLNG
LTQTSNTFKGEEVVNGLSKESNAKDVRDPKKDWKRKKGFRKGFKKFPSRKKQKVKISVLS
QSKTESMLHPCEDRQGFRNETQMQRDPFETEVENVRMSAEKHQYQTAKLQKKKNKIIPVS
YSCESVGKTSQGSCRMGPTKVDLNLWDYFQDSSCTQHITGYEKKTLSWVSPFSPLVHKNT
FPIVSIPKKQEMQESKVVSYLCVFDSSDDSD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcaatgtattgaatgttgaggagatattcagcattcctggggcaacaagggga
aacaagttatcctttggcaggagtggcacccacagtggacactcaagaatgacagatccc
atgttcctggctggatgtcgggttcgacacagtcattctcaggatacataccaggagatg
agtcagccatccataacagccctggcctttcagcatggttctcaagaagtaaatgagcca
aaaggttcagcaaaatatcagacaaggccctataatttcggagtggacaaatgggagaaa
cctatagagtctcagcttggatgtgggaaagccaaaggaatcttgggactatttgaagaa
agcaagaaaaaagctaaagagaaagatgaaagtgagttgttcaataatagattttcacaa
cttgaggaaagcgtggatcacataaaaatatctttaaatagaattgagagccaggcagat
tctagaaagacatttattgctgaaggtctggatgtttgttcaaagcaattggaggacaaa
gtgagatcaatttgtgatccagtactaagtgagctgaaatctcaaagtcaagtactggca
gagatggaaaaaatggagacagaaatgaaatcttgtatgttagctctgcaggacaacgta
gaaagaatgaaaatggagcatagcaaagataatgggaaaataagtgaaaagctggatttg
ttaaacagcagcctaaagtttgatgaacttgtgtcttttctcaccaacttggcgtcctct
tataggcctacgtgtaatgttaaagattgcactgttcagacatcacctcgtttgtgtgaa
aatttttgtcttgtcagcgaagaaaagacttactttgaaagcacacgggtatgtaaaact
aacacactacagcccagcactgctctcatgccagaggagttgggcaatgggacatcaaca
tctgaaaaggaatctgatgaacaatgtgccaaagtctcgggaacaataaacgaacaagcc
attttttttctagatgaggatcgatcaatgaatactttaaaaaacagagtagatgagaat
ccttccttgagttcatattacatgcattctactggggcaatttccggcctctctgagcca
gacaatgggttacaaacatattttatgaaagaaaatgaacaacatgaaagaaaagggcat
gtccagtccagccatatttcagacacacaaaatgaaaataacctctatgggttaaatggg
ttgacacagacctcgaacactttcaaaggtgaagaagtggtcaacggtcttagcaaggaa
agcaatgctaaagacgtccgagatcctaaaaaagactggaaacgaaaaaaaggctttagg
aaagggtttaaaaaattcccttccaggaaaaagcaaaaagttaaaatatcagtgttgtca
caaagtaaaacagaaagtatgctgcacccttgtgaagacaggcaaggctttagaaatgaa
acccaaatgcaaagggatccctttgagactgaagttgagaatgtaaggatgtcagctgaa
aagcaccaatatcaaacagcaaaactccaaaaaaaaaagaataagattattccggtgtct
tattcctgcgagagtgttggaaaaactagccaaggaagctgtagaatggggcccacaaaa
gtagacctaaatctatgggactattttcaagacagctcatgtacacagcatattactgga
tacgaaaagaaaacactttcctgggtaagtccatttagccctttagtgcacaaaaatacc
tttcctattgtcagtattcctaaaaaacaagaaatgcaagaaagcaaagttgtttcatat
ttatgcgtttttgactccagtgatgattctgattaa
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