Lepisosteus oculatus (spotted gar): 107077708
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Entry
107077708 CDS
T07349
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107077708 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loc03400
]
107077708 (uimc1)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
107077708 (uimc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
107077708
NCBI-ProteinID:
XP_015205368
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All DBs
Position
LG6:38553896..38575101
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AA seq
956 aa
AA seq
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MPQKRRIRAREADQVPKKRHLAENNGEFVVVSDAESEKQHDVLLSREDRLQARQQSGQAR
DMTEDEMVSLAMRMSEQEARRTKQRDKEEDEAVRRAIVESLHESSRCDDPDQTSSFEERE
EFAAQKTKRRPTRKKRPNSQSRQVKEGQNEFPELQDGSSSDSESLLRALHKPVLRLEKLS
QEVVGSCKETGFVLCSQDHVPSESSQSSPRLCPPLPESPVFSKGGTGGRPTAPNVSTRRR
QILQGSEQTDGGAGGQENLEELPSCSLDLGDKDVSKRRLSTRRKGSFNSPAQNRRPQADE
EERCTEEIADGQLKQRGREQQSRLQTPHKDELPTCSVKLNDGFPSQMTLHWAEEEDENEE
EDPKKENQERHETDQTQVTPKNTVLEDASSSESETRLKTFSCAPCKSGHTTDHVLEQEEQ
GQQSQELVGSFREARFLLQTQETRAPDPRQNPRLPKRGLGEEGTAPGAESGGSCLPGKFL
VPKTGAAAAAGGRDPGALIEKSSSVAGSPAAKGGSPSGPASSLRDGPQQEPGKRGPDQAA
VLYYWGVPFCPRGLDPDEYTQVILTQMDVYQRSLKAAQRGLLRKAEWGDPVLPAPTEEPP
CKKRRRLRRNESRGTQELGERGWGDEEEEGEGEGAPEEDRQGVPAAGRGEDDPQDGEGGM
NDAEKEEQEDSPLLFSAERSHRKRLSLRRRGLREGSPPEAAQPREEEPELDVCPETQLCD
EGTQQLSSERPASVQPQPVVVVVEEEEEEEGSAAAVEGVTEKDTPAKHVQCPICMQSFPL
LRIEVHAAYCDGPREEELLEEAASQGCARRRSSRKAQVIDENEPTSSAFCKSTSREKCYI
CRGYVPVGDFERHTESCIRRRADEGREDFLTALEQSEQKNIEAESYHSSLKHRKYSEPVS
LLDHEDDAAGEDQVPSDSPVRAFTPISEAKDCLVDFKQQFASRTGQRAGKRRRLKR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagaaaaggcgaattcgtgcgagggaagcggaccaagtgcccaagaagagacat
ctcgctgaaaacaatggcgagtttgttgttgtgtctgacgcagaaagcgagaaacagcac
gacgttctcctgtcaagggaagacaggctgcaggcacgacagcagagcggacaggctcga
gatatgacagaagacgaaatggtgagcctggccatgcgaatgagcgaacaggaagccagg
cggaccaagcagcgggacaaggaggaggacgaagccgtgaggagggcaatagtggagagt
ctacatgaaagcagcaggtgtgatgatcccgaccagaccagctcgtttgaagagcgagaa
gagtttgctgcccagaaaacaaagagacgtcccaccaggaaaaaacgcccaaattcccaa
tccaggcaggttaaagagggccaaaatgaattcccagagcttcaggatggcagctcctca
gattccgagtccctgctcagggcacttcacaaacccgtcctgcgcctggagaagctgagt
caagaagtggtgggcagctgcaaggaaacgggatttgttttgtgttcccaagaccacgtg
ccttcggagagctctcagtcctccccaagactctgccctccacttcctgagagccctgtc
ttctccaaggggggcacaggtgggagaccgacagccccgaacgtgagcaccaggagaagg
cagattctccaaggcagtgagcagacggatggaggtgcgggcggacaagagaatttagaa
gagttgccctcctgcagcctggatctcggtgacaaagacgtctctaaacgcagactgtcc
acaagaaggaaggggagctttaacagcccggctcagaatagaaggccacaggctgatgag
gaggagagatgcactgaggaaattgctgatggacagctgaagcagagaggcagggagcag
caaagcaggctgcagacgcctcacaaggatgagttgcccacctgtagtgtgaaactgaac
gatgggtttccaagtcaaatgaccttgcactgggctgaggaagaagacgagaatgaagag
gaagatcccaagaaggaaaaccaggagaggcacgagacggaccagactcaagttactcca
aaaaatacagtattggaggatgccagctcctcagagtccgagacccggctgaagaccttc
tcttgtgccccgtgtaagtctggacataccaccgatcatgtcctcgagcaagaagagcag
ggtcagcagagtcaggagctggtgggcagcttccgggaggcgaggttcctgctgcaaacc
caggagactcgagctcctgaccccaggcagaaccctcggcttcccaagagaggcctaggg
gaagaaggcactgcgccgggggcagagagcggaggaagttgcctccccgggaagttcctc
gtcccaaaaaccggcgccgcagcagcagctggaggccgagatccaggggctttaatagag
aagtcctccagcgtcgcagggagcccagctgccaaggggggaagcccttccgggccggcc
tcgtcgcttagagacggtccgcagcaagaaccggggaagagggggccagaccaggcagct
gtgctctactactggggcgtgcccttctgcccgaggggcctggacccagacgagtacacg
caggtgatcctgactcagatggacgtgtaccagcgaagtctgaaggcggcgcagaggggg
ctgctgcgcaaggcagagtggggggaccccgtactgccagcccccaccgaggagcccccg
tgcaagaaacgccggaggctgagaaggaacgagagtcgggggacacaggagcttggggag
agaggctggggggacgaggaggaagagggcgaaggggagggagcccccgaagaggaccgg
cagggtgtcccagccgctggacggggggaagatgacccgcaggacggcgaggggggcatg
aacgatgcggagaaggaggagcaagaggattctccattgctgttcagtgcggaaagatcc
cataggaagcgattgtctttgaggaggcgtggcctgcgggagggcagcccacctgaggca
gcccagccgcgcgaagaggagccagagctcgacgtctgtcctgagacccagctgtgtgat
gagggcacccagcaattgtcttctgagagacctgccagtgtccagcctcagcctgtcgtg
gtggtggtggaggaggaggaggaggaggagggtagtgctgccgctgtcgagggggtaacg
gagaaagatacaccggccaagcacgtgcagtgccccatctgcatgcagagcttccctctc
ctgcgcattgaggtgcatgctgcctactgcgacgggccccgggaggaggagcttctggag
gaggcagcctcgcagggttgtgcccgaagaagaagtagtaggaaagcacaagtcattgat
gagaatgaacccacttcctcagccttttgcaagtcgacttcacgggaaaagtgctacatc
tgcagaggctatgtccctgttggtgattttgagaggcacacggagtcctgcatccgccga
agagcagatgagggacgagaggatttcctcactgctttggagcagtccgaacagaagaat
atcgaagctgaatcttatcattcatcactcaagcacagaaaatacagcgagccggtctcc
ctcctggaccacgaggatgacgctgcgggagaggaccaggtgccgagcgactccccagtt
agagccttcacccccatctccgaggccaaggactgccttgtggacttcaaacagcagttt
gcctccaggacgggccagagggctgggaagagaaggaggctgaagagatag
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