Lepisosteus oculatus (spotted gar): 107079901
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Entry
107079901 CDS
T07349
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107079901 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
loc01009
]
107079901 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
107079901 (ncor1)
Protein phosphatases and associated proteins [BR:
loc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107079901 (ncor1)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
107079901 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
DUF3653
Motif
Other DBs
NCBI-GeneID:
107079901
NCBI-ProteinID:
XP_015222797
LinkDB
All DBs
Position
LG22:3938249..4010082
Genome browser
AA seq
1953 aa
AA seq
DB search
MSSSGYPAGQGAFSTEQSRYPPHSVQYTFTTARHQEFAVPDYRPHLQEVSSASQLLQQQQ
LRRRPSLLSEFHPGTERPPDRRHGTYEQQFHTVSSQSDHEALESKRPRIEAVSEAHFQRA
AAAGVLSLTHTLPDGLRASADVKKETTSFNVKTEASSPGPGTQHLVDEQDASPSKLSKEE
LIQSMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVSPPPVEQKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQKICQRYDQLMEAWEKKVERIENNPRRKAKESRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINM
NGLMDDPMKVYKARQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYL
TKKNENYKTLVRRNYGRRRGRSNHQQITRPSQEEKAEEKTEEDKAEKKEDEEKKEEEEKD
EKEESKDIGKDRDKCEGGGEDEEGKEQATPRGRKTANSQGRRKGRITRSMASEAAAVAAE
EGPAPPPAPAEPAPQEPAQPPKAEAAPKSSRDQAKGSLVTMETQAHRGTAESGETSRWTE
EEMEVAKKGLVEHGRNWSAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQGARRSR
GDRDVSQSESVASTISAPEDEENEGSNEEENPEDSEVDDLEWRMFALDRPSLLSPAGSVL
VSSAIKQGHLNVQQLQQRAAMIPPMVSPAFGAAVNPPLSGLAMYQQQITAAVHEASHQEE
KQRQDQADPERRSSSCPRTGTKSPSVLDRDAGKPFAYMPYEVKLSMEQDAQSHGNSARSA
SPYRLSPREFNKASPQPEASRYSVPPVLQPAPNQILPSLPDGVRVTFSRPTRPANIPSPP
PLIPSSKPSDKPSFIMGGSISQGTPGTYLPSHSQTVYSQEAAKSSVGSISLGLPRQQDPS
KPVSYIKQEECSPRGQAAQAEGLLSRAQYEGVVRGNPMSAIQEGSITRGTPAKVSAEGLA
FRGGSITQGTPALPQSGIPADLLLKGTITKLATEDVGSPEKAREEGLSKGHVIYEGKSGH
IVSYDTVKNVREGTRSPRTGHELIGVKRSYEMMEGSITRGHPVRESQVSAPYEGLISRAL
PREGPHADPKERTVLSGSIMQGTPRATAEAFDEGHKYGKQIKRESPPIRTFDGAITKGKP
YEPVTTIKEMGRSIHEIPRQELSGQESRKTPDMAQNTRPIIEGSISQSGKAVSHERKNTL
TPTQRDSVSAKSPVSGGDPLAPHSPFDPHHRGVVPGEVYRAHLPPHLDHTIAFHRALDPA
YLFPRQPSPTGYHNTYQLYAMENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQITIP
YPPGARGIIDLAQMPPAILLPHPGGTSTPPMDRITYIPGTQAPFPPRAFNPASISPGHPA
HHAVSSASAEREREREREREREQREREKEREKEREREQREREREQRESLFCYLVSSSRYD
APSGDAVELVSPATSPAQSQEKQDTSFSQEMTKPAQAEAEQRSFESQMGRYRQQSESPSP
QQPPSSQADMYPQVPKTHRVMTLADHISLGSVAMDTYEPISPPQSYPSMDKQEAMLQQAQ
RREADNPEQRSDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMASA
QPGTEIFNLPAVTTSGGVSSRSHSFADPASNLGLEDIIRKALMGSFEDKQEEHQGANSQA
ISMAMGNMTTTMTTMSDARREEANPSPGTGHAAGKQKLAGKANSRKSKSPIPGQGYAGAE
RPSSVSSVHSEGDYHRQTPAWAWEDRPSSTGSTQFPYNPLTMRMLSTTPPTTIACGPPAL
QAQPGLLPQSRMWERETTPILMEQYETLSDSDD
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgggataccctgctggccagggggccttcagcaccgagcagagccgttac
ccccctcactcagtccagtacactttcaccacagcgcgccatcaggagtttgcagttccc
gactaccggccacacctgcaggaggtcagctcagcctcccagctcctccagcagcagcag
ctccggaggcgcccctccctgctctcggagttccaccctgggacagaacggccgcccgac
aggaggcatggcacttacgagcagcagttccacaccgtgtcctcccagtctgaccacgag
gccttggagtcaaagaggccgaggatcgaggcggtttccgaggcccatttccagcgtgct
gcggcggctggggtcctgtccctgacacacacgctgccggatggcctgagggcttcggcg
gacgtgaagaaggagaccacatcgttcaacgtgaagaccgaggcctcttccccgggacct
ggcacccagcacctggtggacgagcaggacgcctccccgtccaaactgtccaaggaagag
ctgatccagagcatggaccgcgtggacagggaaattgccaaggtggagcagcagatcttc
aaactcaagaagaagcagcaacaactggaggaggaagcagcaaagccagtagagccagag
aagccggtctctccaccacctgtggagcagaagcaccgcagcatcgtgcagatcatctac
gacgagaacaggaaaaaagctgaagaagcccataagatatttgaagggcttgggccgaaa
gttgaactgcccctctataatcagccatcagatacaaaggtttatcatgacaacattaaa
accaaccaagtgatgagaaagaagcttattctgttttttaagaggaggaatcatgcacgc
aagcagagggagcagaaaatctgccagcgctacgaccagctgatggaggcatgggagaag
aaggtggagcggatcgagaacaacccgcggaggaaagccaaggagagccggaccagggag
tactacgagagacagttccccgaaatccgcaagcagcgggagcagcaggagcggtttcag
agagtgggccagcgagggacgggcctttcagccaccatagccagaagcgagcatgagatt
tcagaaatcatcgacggactatccgaacaggagaacaacgagaaacagatgcgtcagctc
tctgtcatcccacccatgatgtatgattccgagcagaggagggtgaagttcatcaacatg
aacgggctgatggacgacccgatgaaggtgtacaaggctcgccagttcatgaacgtctgg
actgaccacgagaaggagatctttaaggagaagttcgtgcagcatcccaaaaactttggg
ctcattgcttcgtacctagaaagaaagtgcgttgcggactgcgttttgtattactacttg
acgaagaagaacgagaactacaagaccctggtgaggcgcaactacgggcggcgcagaggg
cgcagtaaccatcaacagataacacgtccttctcaagaagaaaaagcagaagaaaagacc
gaggaggacaaggcggagaaaaaagaggacgaggagaagaaggaagaggaggagaaagat
gagaaagaggaatcgaaggacatcggcaaagacagagacaagtgcgaaggcggcggagag
gacgaggaaggcaaagaacaagccacgccacgcggcaggaagaccgccaacagccagggc
cggcgcaagggcaggatcacgcgctccatggccagcgaggcagcagccgtggcagccgag
gaaggccccgcgcccccgcctgcccccgcggagcccgcaccacaggagcctgctcagccc
ccgaaagcagaggcagcaccgaagagcagccgggaccaggccaaaggcagcctggtaacc
atggaaacgcaagcacacagaggcactgcggagtctggggagacatcgcgctggaccgag
gaagaaatggaagtagccaaaaaggggttagtggagcatggacgcaactggtcagccatt
gccaagatggtgggcaccaagagcgaagcccagtgcaagaacttctacttcaactacaag
agacgacacaacctggataatctcctccagcagcacaagcagggtgcgcggcgttccagg
ggagatcgagacgtgtcgcagagtgagagtgtggcctcgaccatctccgctccagaggac
gaggagaatgagggctccaacgaggaggagaatcccgaggacagcgaagtggatgacctg
gagtggaggatgttcgctctagacaggccgtctctgctcagccccgctggctcagtcctg
gtgtcttcggccatcaaacaagggcacctcaacgtgcagcagctacagcagcgagccgcc
atgatccctcccatggtgtcccctgccttcggcgccgccgtgaaccccccgctgagcggc
ctggccatgtaccagcagcagatcacggcggcggtgcacgaggcctcgcaccaggaggag
aagcagcgccaggaccaggcggacccggagaggcgcagctccagctgcccccgaaccggc
accaagagcccctctgttctggaccgggacgctgggaagccattcgcctacatgccttac
gaggtgaagctgtcaatggaacaggatgctcagtctcacggtaactctgccaggtctgca
tctccatacaggctttcccccagggaattcaacaaggcctccccacagcccgaagcctct
cgttacagcgtgccaccagtcctccagcctgctccgaaccagatcttgccgagcctccct
gatggagtccgggtgacattttccagacccacaagacctgccaacattccgtctcctccc
cccctcattccatcttccaaaccatccgacaagccatcctttatcatgggggggtccata
tcccagggaactccaggaacgtacttgccttctcacagccaaacagtgtacagtcaagag
gcagctaagagctctgtaggctccatttccttgggccttccgagacagcaggacccctcc
aagccagtgtcgtacatcaagcaggaggagtgctctcctagaggccaggctgcccaggct
gaagggcttttgtcacgggcgcagtatgaaggtgtagtgagaggtaacccgatgtccgct
atccaggagggcagcatcacgagaggcactccagccaaggtctctgccgagggccttgct
ttccgaggtggctccatcactcagggaaccccagctcttccccagtccggcatccctgca
gacctgctgctgaaaggcaccatcaccaagctggccacggaggatgtgggcagccctgag
aaagccagggaggagggtctctccaaagggcatgtcatctacgaagggaagagcgggcac
atcgtctcttacgacactgttaagaatgtaagagaaggcacaagaagcccgaggacaggc
cacgagctcattggggtgaaacgcagctatgaaatgatggagggatcaataaccagaggc
caccctgtaagggaatcccaagtttcagcaccttatgaaggtttgataagtcgtgcactg
ccaagggaaggccctcatgcagatcccaaagaaaggactgtactatctggatccatcatg
caagggacgccacgggcaacggcagaagcttttgatgaggggcacaagtacggcaagcag
attaagcgcgagagccccccgatccgcaccttcgatggagccatcaccaagggcaagccc
tacgagccggtgaccactattaaggagatgggccgctccatccacgagatcccccggcag
gagctatcgggccaggagagccgcaagactccagacatggcgcagaacactcgccccatc
atagaagggtctatatcccagtctgggaaagcagtgagtcacgagaggaaaaacaccctc
accccaactcagagagacagcgtttctgccaaatcgccggtgtctgggggtgacccactg
gccccccacagccccttcgacccccaccaccgcggcgttgtcccaggggaggtctaccgg
gcgcacctgcccccccacctcgaccacactatcgccttccaccgtgcgcttgacccagct
tatttatttccaagacagccttcgccaactggttaccacaacacgtatcagctgtacgcc
atggagaacacacgccagaccattctcaatgattacatcacctcccagcagatgcaggtc
attccccggcctgacgttgctaggggactgtcgccacgggagcagcagatcaccatcccc
tatccgcctggagcaagagggattattgatctagcccagatgcctcccgctatcctgttg
cctcacccagggggaacaagtactcccccaatggaccgcatcacctacatccctggaact
caggcccctttccctcctagggctttcaacccagcttccatatctccaggtcaccccgcc
caccacgcggtgtcgtcggccagcgcggagcgcgagcgggagcgggagcgggagagggag
agggagcagagagagcgcgagaaggagagggagaaggagcgagagagggagcagagggag
agggagagggagcagagggagagtctgttctgttatctagtgtcttccagtcggtatgat
gcacccagtggggacgccgttgagctcgtcagccctgccacctctccggcacagtcgcag
gagaagcaggacacctccttctcgcaggagatgaccaaaccggctcaggctgaggctgag
cagcgctcgttcgagtcccaaatgggtcggtaccggcagcagtcggagtcgccctcccca
cagcagcccccttcctcccaggccgacatgtacccccaagtccccaagactcaccgcgtc
atgacgctggcagaccacatctcgcttggcagcgtggctatggatacgtacgagcccatt
tcccccccgcagagctaccccagcatggacaagcaggaggccatgctgcagcaggcccag
agacgggaggccgacaacccagagcagaggagtgactctcgctctcctggcagtgtaagc
tacctgccctctttctttactaagctggagaacacctccccaatggtgaaatccaagaag
caggagatatttcgtaagttgaactcctctggtggcggggattctgacatggcaagcgca
cagccggggacagagatctttaacctgcctgcagtcaccacttctggtggcgtcagctcc
aggagtcactcctttgcagacccggcgagcaatctgggtctggaggacatcatccgcaaa
gccctgatgggcagctttgaagacaagcaggaggagcaccagggagccaactcccaggcc
attagcatggccatgggcaacatgaccaccaccatgaccaccatgagcgatgcccggaga
gaggaggccaacccttcccctggcacaggccatgcagcgggcaagcagaagctggctggg
aaggcaaacagcaggaagtccaagtctcccattccagggcagggctacgccggcgccgag
cggccctcctcggtgtcttcagtccactcggagggggactaccacagacagactccggcc
tgggcctgggaggaccggccctcttccacaggatccacgcagttcccctacaaccccctg
accatgcgcatgctgagcaccacccccccgaccaccatcgcctgcggccccccagccctg
caggcccagcccggcctgctcccccagagccgcatgtgggagcgggagaccacgcccatt
ctgatggagcagtacgagaccttgtcagacagcgacgactga
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