Lepisosteus oculatus (spotted gar): 107079925
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Entry
107079925 CDS
T07349
Symbol
itgae
Name
(RefSeq) integrin alpha-E isoform X1
KO
K06524
integrin alpha E
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107079925 (itgae)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
loc04515
]
107079925 (itgae)
04090 CD molecules [BR:
loc04090
]
107079925 (itgae)
Cell adhesion molecules [BR:
loc04515
]
Integrins
Integrin alpha subunits
107079925 (itgae)
CD molecules [BR:
loc04090
]
Proteins
107079925 (itgae)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Peptidase_S49_N
EphA2_TM
Integrin_alpha
DUF281
Motif
Other DBs
NCBI-GeneID:
107079925
NCBI-ProteinID:
XP_015222947
Ensembl:
ENSLOCG00000003409
UniProt:
W5M6Q5
LinkDB
All DBs
Position
LG22:complement(3859604..3883146)
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AA seq
1130 aa
AA seq
DB search
MAHNCLLWLITVYAVEGFNIYSKPIKTFEELNSPSLGQSVLQYEDGILVTSPLDNMSDQQ
YGRLYDCKVSAQCTEVSLTAKEKSYRKPIISAAKSSDGSTYLVCQQHRTRKATNEDLNGV
CSLLKAGFQEISDIAPASLVVKQMKRNNTNANKQEDESLSVNSGSALHRRKRESSNQEEE
EDEDAGTEIAFVLDGSGSISGEDFERAKEFVTNVMKNVWETCFDCRFALVQYGKDIRTEL
SLKENEKPEYALRKVSDIQQIYNYTKTASAMYHVLEHVFVAENGSKENAKKIMIVLTDGK
IFLDTMNLSDVLMMPKMKAVTRFAIGVGADFNQTKAVTELQDIASDPDDEHLFKVDNYAA
LDGILSLLEKSITGIEGTQQGAAFLFELSEAGFSIDFAIDGTVLFGAVGAYDWNGGLIIK
NPDDTIRFLNESSTKEKLSYLGYSVAAVKGVSGSLYVSGAPRHSFSGSVLVFNGTSHAAQ
QTLSGEQVGSYFGAELCVLDTDKNGITDHLLIGAPLFHQKGEEGKVYVYRLSQGLFIKES
EWRGMNRYTFARFGSAIANIGDIDDNGYNDIAVGAPMEGDGKSGSIYIYNGYENGIKDHH
SQRIAAADFDVKLRFFGQSVSGMSDLDKDGQIDISVGSLGKVTVLSSLPVIVFKPQVTLD
PPYISLNKQSGQDSKKISAKICFNSVKREIKKKTEELPIHYHLVLDPNKEKKRLSFANGD
PKSISGIFKLTNTMECLPDILLQFLECADDCFSPVEIKLNFTLNLSSESRPLRVLDMLSP
NEISQQLPFETNCGTDKICTANITLSTSLPQDKTLVIGSTKDLSLGFNMKNIGEDSHMTI
LVLTYPHFLQYNKLSLLTENKGISCANPVDNTKLTCQIRYPVMKAQSEVNFTISWQIEES
HKIQENSTQITANITCENNGLQVLTEETYRFAVKNALKVSLTGKAKPAYIHVTEESMGKK
QELEYLFQIHGENRYNANIVVNIDIPLKERDTQVTIVSYKARHTTNCSAQPQDNGKTYRL
TCTVQELDELLTVEASVAVISIKDQRENLTARAFLSFDSAQYEADEGGRYEEVLVTIEKL
TVVKSMAVIVGSSIGGFVFLAFLILILIKCGFFRRRYQKARVEQKSDQDM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcacataattgtctattgtggctaatcactgtatatgcagtggagggttttaatatt
tactccaagccgattaaaacttttgaagaattgaacagcccttccctagggcaatctgtc
cttcagtatgaggatgggatcttagttacttctcccttggacaatatgagcgaccagcag
tatggtagactttatgactgcaaggtctcggcacagtgtactgaagtcagcctcacagcg
aaagagaaaagctatcggaaacctatcatatcagcagctaaaagctcagatggatcaaca
tacctggtctgtcaacaacaccggacacgcaaggccacaaacgaagatctgaatggagtt
tgctccctcctcaaggcaggcttccaggagatttctgacattgctcctgcatcactcgta
gtgaagcagatgaaaagaaacaacaccaatgccaacaaacaagaggatgaatccctttca
gtgaactccggatccgcccttcatcggagaaagagggagagcagtaaccaagaggaagag
gaggatgaagatgctgggacagagattgcctttgtcttggatggttctggaagcatttct
ggagaagattttgaaagggcaaaagaattcgtaactaatgtgatgaaaaacgtttgggaa
acctgctttgattgtagatttgcacttgttcaatatggaaaggatatacgaactgaactc
tcactcaaagaaaatgagaaacctgaatacgcattaagaaaagttagtgatattcagcag
atctacaactacacaaaaactgcttctgctatgtatcacgtccttgaacatgtctttgtt
gctgaaaatggatctaaagagaatgctaagaagatcatgattgttctgacagatggaaag
atatttctagacacaatgaatctctcagatgttttgatgatgccaaaaatgaaagctgta
acccgatttgctattggggttggtgctgattttaatcagacaaaggcagtaactgaacta
caagacattgcttcagacccagatgatgagcatttatttaaggttgataactatgcagct
ttggatggcatactctccttgcttgaaaaaagcatcactggaatagaagggacacagcag
ggagcagccttcctcttcgagctttccgaagctgggttcagcattgattttgcgatcgat
ggcactgttcttttcggcgcagtgggggcatacgactggaatggtggcttaattataaaa
aacccagatgacacaataaggtttctaaacgaatcatcgacaaaagaaaaattatcctac
ttaggctacagtgtagcagctgtgaagggagtcagtggcagtctgtatgtgtcgggagcc
cctcgtcacagtttctcaggcagtgtgctggtcttcaatgggacttctcatgcagcacag
cagacactgtccggagagcaggtgggctcttattttggtgctgagctttgtgttcttgat
accgataaaaatggcatcacagaccacctcttaattggagctccactgtttcaccaaaaa
ggagaagaaggcaaagtttatgtctacagactgagccaggggctcttcatcaaggaatcg
gaatggcggggaatgaacagatatacctttgccaggttcggatcagcgattgccaacatc
ggggacatcgacgacaacggctacaacgacattgcagttggagctccaatggaaggagac
ggaaaatcagggagcatctacatttacaacggctatgaaaatgggatcaaggaccatcac
tcgcagagaatagcagcggctgatttcgatgtgaagctacgattcttcggtcagtcagtg
agtgggatgtccgacctggataaagatggacaaatagatatcagtgtgggaagcctgggg
aaggtcactgtattgagctcactgcctgtcatcgtcttcaaacctcaagtaacgttagac
cctccatacatttccctgaataagcaaagtggtcaggattctaaaaagatttctgcaaaa
atctgctttaactcagttaaaagagagattaagaaaaaaacagaggaactacccattcac
taccacctggtcctcgacccaaacaaagagaaaaaacgactgtcttttgcgaacggtgat
cccaaatccatttctggtattttcaaactcactaacacaatggaatgcttgcccgacatc
cttctacagttcctggaatgcgccgatgattgtttctcacctgtagagattaaactcaat
ttcactctaaacctctcttctgagagccgtccactcagagttctcgatatgctcagtccc
aatgagatctcccagcagcttccctttgaaacaaactgtggaacggacaagatatgcact
gcaaacatcaccttgtcaacaagcttgccccaggataaaacactggttattggatctact
aaggatctcagcttaggctttaacatgaagaacatcggagaagactcccacatgaccata
ctggttttaacttatccccatttccttcagtacaacaagctgtccttgttaacggagaat
aagggcatttcctgtgcaaatccagttgataacacaaaactgacttgtcaaatacgatat
ccagttatgaaggcgcaaagtgaagtcaatttcaccatctcctggcagatagaagagtct
cataaaatacaggaaaacagcacccaaatcactgctaacattacatgtgaaaataatggt
ctccaagtgctgactgaagaaacctaccgatttgcagttaaaaacgcccttaaagtcagc
cttactgggaaggctaaaccagcttacatacatgtgactgaagagtcaatgggcaaaaag
caggagctggaatacctgttccagatacatggagaaaacaggtacaatgctaacattgtt
gtgaacatcgacattccactgaaagagagagacacacaggtgaccattgtgagctacaaa
gcgaggcacacaacaaactgcagcgctcaacctcaagataatggaaagacttacagactt
acctgcaccgtgcaagaactggacgagctcttgactgtggaagcatcggtggctgttatc
agcataaaggatcagcgggaaaatctaacagctagagcttttcttagttttgactccgct
cagtacgaggcagacgaaggaggacgatatgaagaggtgctggtgaccattgagaagctg
actgtggtgaagtcgatggctgtgattgtcgggagctctatcgggggctttgtcttcctg
gcctttttaatcctcatcctaataaagtgtggctttttccgaagacgctatcaaaaagca
cgagtggagcagaagagtgaccaagatatgtaa
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