KEGG   Leishmania orientalis: 92357114
Entry
92357114          CDS       T10351                                 
Symbol
LSCM4_01115
Name
(RefSeq) hypothetical protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
loi  Leishmania orientalis
Pathway
loi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:loi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92357114 (LSCM4_01115)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loi03019]
    92357114 (LSCM4_01115)
   03041 Spliceosome [BR:loi03041]
    92357114 (LSCM4_01115)
   03032 DNA replication proteins [BR:loi03032]
    92357114 (LSCM4_01115)
Messenger RNA biogenesis [BR:loi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     92357114 (LSCM4_01115)
Spliceosome [BR:loi03041]
 Complex A
  U1 snRNP components
   Sm proteins
    92357114 (LSCM4_01115)
  U2 snRNP components
    92357114 (LSCM4_01115)
 Complex B
  U1 snRNP components
    92357114 (LSCM4_01115)
  U4/U6.U5 tri-snRNP components
    92357114 (LSCM4_01115)
 Complex C
  U2 snRNP components
    92357114 (LSCM4_01115)
DNA replication proteins [BR:loi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     92357114 (LSCM4_01115)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 92357114
NCBI-ProteinID: XP_067059830
UniProt: A0A836H132
LinkDB
Position
34:1582334..1582675
AA seq 113 aa
MAESIPMKVLFDALHLKVSIEVATGEVYHGTVEELQNNMNVLLKDATKTTRSGKETKMDS
VFVRGSNIVFFQLPDALQTSPALLRAGEVVSKAKDTRGDGKGFGASRKRLRNS
NT seq 342 nt   +upstreamnt  +downstreamnt
atggcggaaagcattccaatgaaggtgctcttcgatgcactgcatctgaaggtttccata
gaggtcgccaccggagaggtgtaccacggcaccgtagaggagttgcagaacaacatgaat
gtgctccttaaagatgccaccaagacgacacggagcggtaaggagaccaaaatggactct
gtctttgtgcgtggctcgaacatcgtctttttccagttgcccgatgcgctgcagaccagc
cctgcgttgctccgtgctggcgaggtcgtgtcgaaggcgaaggatacgcgtggtgacggc
aagggatttggcgcgtcgcgcaagcgcttgcgcaattcgtag

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