Leishmania orientalis: 92359059 Help Entry 92359059          CDS       T10351                                  Symbol LSCM4_03107 Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism loi  Leishmania orientalis Pathway loi03020   RNA polymerase loi03420   Nucleotide excision repair Brite Enzymes [BR:loi01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      92359059 (LSCM4_03107) Transcription machinery [BR:loi03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      92359059 (LSCM4_03107) DNA repair and recombination proteins [BR:loi03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       92359059 (LSCM4_03107) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 C1_1 Motif Other DBs NCBI-GeneID:  92359059 NCBI-ProteinID:  XP_067060677 UniProt:  A0A836KI44 LinkDB All DBs Position 31:complement(107519..111076) Genome browser AA seq 1185 aa AA seqDB search MAQDELLDLEDPDMVLNDGVVDGHDDENPNDDLDSEDIWEVISSFFREKGLVHQQLDSYN DFLMRIPKMIESMAVIPRQDDQYDPGVTMEEQRDQPRLVLQDVVIGNPSHQTHAYFAGGP LPPLFPNECRLRDMTYDAQAQVTLGVELYHPHADTPHDTFLRNVELGRIPIMLKSMRCNL SGKDEDELPRLNECPHDQGGYFVINGTEKVLIAQERQAANHVYTFSRQKGLLCEVKSIVE GSLNKPRTLQIIMQYKNKGPGSGFENLMCRVAQMDETIPLFVLFRAMDMVADKEILQTVV PDLKDTAMLELLRGSMSDASTLQIFTREEALGYIGRRLGKQDAMVNLQREAESLLMRDLL PHMGTDPSANRTKCLYMGYMVHKLLLVALGRHEETDRDFLGHKRIDVAGTLLTVQLQTFL AQVRKEMIKTLQDHAANPRGVFSFGRVIHSKLVTDGLRRCLATGNFGDLKTGNIKTGVAQ TLNRLTYSSSLSNLRRIQNPIAASSKATRPRNLHCTQWGYICPVETPEGGSIGLLKNVAL MCLMSRGTDHAEVVQAVQARIDGFRTIGLEDTADVRVARVFVNGTMIGVDRNPERLLHDL RTRRRNGELSNEVSIVRDIRDREIRVFSDGGRCLRPLFVVENCHLKLRKSGMRDLLVSEK AGGKKSISWGTVLKKGYVELIDCEEEDSLLIAMTPSEAEKNDYYSHCEMDPSMILGICAS IIPYPNHNQSPRNTYQSAMGKQAMGIYASNFNMRMDTTAHVLFYPQKPLVRTKAMTYMHS NDLPAGHNAVVAIACYSGYNQEDSIIMSRSAVERGFFRSAFWRSFKAKEERQKRDALETF ENPDREVCRVKRADYSKLDTDGLIKPGMRVLGGDVVVGKTIPLPEADLEKLTTGNTKITK RDASITSRTTEKGVVDKVMLTMNNGDRFTKVKIRTIKIPNIGDKFCSRHGQKGTNGIQFR QEDMPFNRDGVVPDLIINPHAIPSRMTVAHLIETLAGKVACYKGGEVYATPFCSVVVDDF GKALHALRSQRYGNECLYNGHTALPLDHLIFFGPTFYQRLKHLSGDKIHARPRGPLQPLV RQPTEGRAHEGGLRFGEMERDCMLSYGASQWLRERLFRVSDYYTVHVCNLCGTICVADTK LNRYQCKGCENDTRISQVLMPYACKLLFQELMSMTILPRLGTGPL NT seq 3558 nt NT seq  +upstreamnt  +downstreamnt atggcgcaggatgagctgctggacctggaggacccggacatggtcctcaatgacggcgtc gtcgacgggcacgacgacgagaaccccaacgacgacctcgacagcgaagatatttgggag gtcatctcgtctttcttccgggaaaaggggctggtgcatcagcagcttgactcgtacaac gactttctcatgcgtatccccaagatgatcgagagtatggctgtgatcccgcgccaagac gaccagtacgacccgggcgtcacaatggaggagcagcgcgaccagcctcggctcgtgttg caggacgtggtcattggcaatccgtcacaccagacacacgcttactttgcgggtggcccg ctcccgccactcttcccgaacgagtgccgtctgcgcgacatgacgtacgacgcgcaggcg caggtgacgcttggagtggagctgtaccatccccacgccgacacgccgcacgacaccttc ctgcgcaacgtcgagctggggcgcatccccatcatgctgaagtccatgcgctgcaacctt agcggcaaggacgaggatgagctaccgcgactaaacgagtgtccgcacgaccagggcggg tacttcgtgatcaacggtacagagaaggtgctcatcgcgcaggagcggcaggccgccaat cacgtctacacgttctcccgccagaagggactgctgtgcgaggtgaagtcgatcgtggag ggctcactgaacaagccgcgcacgctacagatcatcatgcagtacaagaacaaaggcccg ggcagcggcttcgagaacttaatgtgccgcgtcgcgcagatggacgagacgattccgctc ttcgtgctattccgggcgatggacatggtggcggacaaggagatcctgcagaccgtcgtg ccggatctgaaggacacggcgatgctggagctcctgcgcggctccatgagtgacgcgagc acgctgcagatcttcacccgcgaggaagccctcggctacatcggccgccgccttggcaag caagacgccatggtgaatctgcagcgggaggcggagagcctcctcatgagagacttgctg ccgcacatgggcacagacccatccgcgaaccgcacaaagtgtctctacatgggctatatg gtgcacaagctgctgctcgtcgccctcgggcgccacgaggagacggaccgtgacttcctc ggccacaagcgcatcgacgtggcaggcacgctgctgacagtgcagctgcagaccttcctc gcgcaggtgcggaaggagatgatcaagacgctgcaggaccacgccgccaacccccgcggt gtcttcagcttcggtcgcgtcatccacagcaagcttgtcacggacggtctgcgccgctgc ctcgccaccggcaactttggcgacctcaagacgggcaacatcaagaccggcgtggcgcag accttgaaccgtctcacctactcgtcctcccttagcaacctgcgacgcatacagaacccc atcgccgcctccagcaaggcgacacgtccgcgcaacttgcactgcacgcagtgggggtat atctgcccggtggagacgccggagggcggctcgatcgggctgctcaagaatgtggcactg atgtgcctcatgtcccgcggcaccgaccacgccgaggtggtgcaggccgtgcaggcgcgc atcgacggcttccgcaccatcggcctcgaggacacagctgacgtgcgcgtggcgcgtgtg ttcgtgaacggcacgatgatcggcgttgaccgcaacccggagcgactgctgcacgacctg cgcacgcggcgccgcaacggcgagctcagcaacgaggtgagcatcgtgcgcgatatccgt gatcgcgaaatccgcgtcttctcggacggtggtcgttgtctgcgccctctcttcgtggtc gagaactgtcacttgaagctccgcaagtctggcatgcgggacctgctcgtctcggagaag gccggtggaaagaagtcgatctcgtggggcacggtgctgaagaagggctatgtcgagctg atcgactgcgaggaggaggattcgctgctgatcgccatgacgccaagcgaggccgagaag aacgactactactcccactgcgagatggacccgtcgatgattctcggcatttgcgcctcc attattccgtaccccaaccacaaccagtccccacgcaacacataccagtccgcgatgggt aagcaggcgatgggtatttacgcctcgaacttcaacatgcgcatggacaccaccgcgcac gtcctcttctacccgcaaaagccgctggtgcgcacaaaggccatgacatacatgcacagc aacgacctgcccgccggccacaacgccgtggtggccatcgcgtgctacagcgggtacaat caagaggactccatcattatgagccgctctgccgtggagcgcggcttcttccgcagtgcc ttctggcgttctttcaaggcgaaggaggagcggcaaaagcgcgacgcgctggagaccttc gagaacccggaccgcgaggtgtgtcgcgtcaagcgcgccgattactcgaagctggacacg gacggtctcatcaagcccggcatgcgcgtcctcggtggcgacgtcgttgtgggtaagacg atcccgctacccgaggcggacctggagaagctcacgaccggcaacaccaagatcacgaag cgtgacgcgagcatcacctcccgcaccacggagaaaggcgttgtggacaaggtgatgctg acgatgaacaacggcgaccgcttcaccaaagtcaaaattcgaaccatcaaaatcccgaac atcggcgacaagttctgcagccgacacggacagaaggggaccaacggcatccagtttcgc caagaggacatgccctttaaccgcgacggcgtcgtaccggacctcatcatcaacccccac gccattccctcccgcatgacggtggcccacctgatcgaaacactggccggcaaggtggcg tgctacaaggggggcgaggtgtacgcgacgccgttctgctccgtcgtcgtggacgacttc ggcaaggccctgcacgccctgcggtcgcagcggtacggcaacgagtgcctctacaacggg cacactgcgctgccgctggatcacctcatctttttcggccccaccttctaccagcggctg aagcacttgtccggcgacaagatccacgcccgcccgcgcgggccgttgcagccgctggtg cgccagccgacggaggggcgcgcgcacgagggtggactacggtttggtgagatggagcgc gactgcatgctgtcctacggcgcctcgcagtggctgcgggagcgtctcttccgcgtcagc gactactacaccgtccacgtgtgcaatctatgcgggaccatctgcgtggccgacacgaag ctgaaccgctaccagtgcaagggctgcgaaaacgacacgcgcatctcccaggtgctcatg ccgtatgcctgcaagctgctcttccaggagctcatgtccatgacgatcctgccacgcctt ggcaccggtcccctttaa

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