Leishmania orientalis: 92359340
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Entry
92359340 CDS
T10351
Symbol
LSCM4_03399
Name
(RefSeq) hypothetical protein
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
loi Leishmania orientalis
Pathway
loi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
92359340 (LSCM4_03399)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loi04131
]
92359340 (LSCM4_03399)
Membrane trafficking [BR:
loi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
92359340 (LSCM4_03399)
Hops complex
92359340 (LSCM4_03399)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_PEP5_VPS11
PEP5_VPS11_N
VPS11_N
Clathrin
Beta-prop_EML_2
zf-C3H2C3
VPS11_C
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
92359340
NCBI-ProteinID:
XP_067060958
UniProt:
A0A836GBH0
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All DBs
Position
31:complement(1486123..1489797)
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AA seq
1224 aa
AA seq
DB search
MMDGVWRSFRFFDSEAFAASSSLAEINAVSACLTPTALVVGDCEGQVFFLDRHPTSATSS
PVSRWCFQAYGGPVTHIRYCAARNTLITIGNDDAVNHTMLRVWDLDQLVALYRGLMGPHA
AAATTSSPGTAAADSSLRWRPPCREHRILPASKGASGGASSMRTSGEEAPLVTILLDESK
QRQYHFKPSASAAGILSSPSGSPISNGSSSGTGEAGSSSNIGVVSCCSIRSLVVSFDVAP
DLSCAAVALATRDCVVLIGDLAKERPVRVLSIRSGIAKGALTFVGLPGTQFVALSGNKGG
GDAGGARAPASLASASMVSGSAGGTAGGVQVLYTVYEDVVTCWALRANGNWSEYPCRTPS
GGAPRFGAVLTAHGELLILSRRAATHSASGSQVVRLGPAAPASSAHAPYDPTVKSSVHTV
HLDHVPGRCFLYTHRQYLALLVQHDGQPEQFQLQCFDLTYRIRGLSRPQETYTNCATLLA
DGADILVLFLDPAVRTRRLALRGTRLSEADTRTKLELLFSKECYGIAQQLAQTMEEADPT
LQLRICKRYGDYLYSKGKLDEAMAQYVNTIGHLESSYVIQRYMGSAHMEQLIRYLEELHS
QQHSAHVHEAHTTLLLRCCIKRKDEARLNAFIHRDNVRFDAKNAIEVCREGGYAEAALYI
ADRYAAVYDCARIRLYDMQKPLDALSYVRGLGIDDAELICLTLGKDLLLAAPRPTTELFM
ELCVHWKGPGRRLVDAPAPPALASDAALFMDGTGGAIGGGPRHPHRANASAFLHIFVDAP
LYLMNFLRAVVESGVLDEEDAAPAPTHMPVEGNAADSSPPAPPPLSMTASSNAVLYNTLL
ELYMTRELKSTLRLIPDTATPSADVSSTNAMTEFPPESYERRLEQALTFLEAHKGRYDPY
QALYLAHQHHFHDGILYLLRSLGLSEEVLGYYRTKLSDSNAAPSERHDATTKLFQACQES
PVSDSSTTAMWMTLLSQLVRTAKTGDVDITKVLDYIEAHDALPPVVVLEILSSGPQNTLE
LRTVRNYCQRCLLKQTQQVQQVLAQTSQRLGAVECIKKELVALQTSAVVFQSTTCAHCHQ
GLDTPAVYFMCKHAFHHRCLYAPTECNICTVAHRRQLDTIREAQQRDMQRQDPRSFTAQF
FQDLKRGPYAAEDVSGARAGPNWSAPQDGFRVVTDYVARGVLGAPPLYKDASLFDCAQAA
PLCPGGGRQRGAKGGNDTEDLHMW
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgatggacggggtgtggcgcagcttccgcttcttcgacagcgaagccttcgcggcctcg
tcctctttagcggagatcaacgcagtgtccgcctgcctcacccccaccgcactcgttgtg
ggcgactgcgaaggtcaggtgttcttccttgaccgccatcccacatccgcgacctcctca
ccggtgagcaggtggtgcttccaggcttacggggggccggtgacgcacattcgctactgc
gccgcgcgcaacaccctcatcaccatcggcaacgacgatgcagtcaaccacacaatgctg
agggtgtgggacctcgaccagctcgtggccctgtaccgcggccttatgggtcctcacgca
gccgcggccaccacttcttctccgggaacagccgcagcggactcctcgctccggtggcgg
ccgccctgccgggagcatcgtattctgcccgccagcaaaggagcgagcggcggcgcttcg
agcatgcgcacctcaggcgaagaggctccgcttgtgaccatcctgcttgatgagtcgaag
cagcggcagtaccacttcaagccgagtgcctccgctgctggtatcctctcctctccctct
ggcagccccatcagcaatggctcctcgtcaggtacaggggaggctggcagcagcagtaac
atcggcgtcgtctcctgctgctccatccgctctctcgtggttagcttcgatgtggcgccc
gatctctcgtgcgccgctgtcgcgctcgccacgcgcgactgtgtggtgctcataggcgat
ctggcaaaggagcggccggttcgggtgctgtcgatccgcagtggcattgccaaaggcgct
ctcaccttcgtcggacttcccggcacgcagttcgtggcgctgtccggcaacaaaggcggc
ggtgatgcaggcggtgcccgcgcaccggcaagcttggcgagcgcatcgatggtcagcggt
agtgcagggggcacagcgggtggagtgcaggtgctttacaccgtctatgaggacgtggtg
acgtgctgggctttgcgagctaacggtaactggtccgagtacccctgccgtacccccagc
ggcggtgccccgcgttttggagcggtactgacggcgcacggcgagctactcatcctgagc
aggcgggccgcaacacactccgcgagcggcagccaggttgtgcggctgggtcctgctgca
cctgcctccagcgctcatgcgccgtatgacccgacggtgaagtcgtcggtgcataccgtc
caccttgaccacgtgccgggccgctgcttcctctacacacaccgtcagtatctcgctctg
ctggtgcagcacgacggacaaccagagcagtttcagctgcagtgcttcgacctcacttat
cgcatccgtggactgagtcgcccgcaggaaacatacacaaactgcgccacgctgctggcg
gatggagcagacattttggtgctgttcctcgacccggcggtgcgcacgcggcggctcgcg
ttgcgtggcacgcggctgagcgaggcagacacgcggacgaagctggagctcctcttcagc
aaggagtgctacggcatcgcgcagcagctggctcagacgatggaagaggccgacccgaca
ctgcagctgcgcatctgcaagcgctacggcgactacctctacagcaaaggcaagttggac
gaggccatggcccagtacgtgaacaccatcggacatctggagtcatcctacgtcattcaa
cgctacatgggcagcgcgcacatggagcagctcatccgctacttggaggagttgcacagt
cagcagcacagcgcgcacgtccatgaggcacacacgacgctactgctcaggtgctgcatc
aagcgcaaggacgaagcgcgcctcaacgcgtttatccaccgcgacaacgtgcgctttgat
gcgaaaaacgcgattgaggtgtgtcgggagggcggatacgctgaggcggcgttgtacatc
gccgaccgctacgccgccgtatacgactgtgcgcgcattcgcttgtacgacatgcagaag
cccctcgatgcgctctcgtacgtgcgggggctcgggatcgatgatgcggagctgatttgc
ttgacgctcggcaaagatcttctcctcgcggcaccgaggcccaccacagagctgttcatg
gagctgtgtgtgcactggaaggggccaggacggcgcctagttgacgcgcctgctcccccc
gcgcttgcgtccgacgctgctcttttcatggatggcacgggaggcgcgatcggaggtggg
ccgcggcaccctcaccgcgcgaacgcgtctgcctttctgcacatcttcgtcgacgcgccg
ctgtatctcatgaactttcttcgagcggtggtggagagcggtgtgctggatgaggaggat
gcggcaccggcgccgacgcacatgcctgtggaaggtaacgcggccgactcatcgccacca
gcaccgccccctctctcaatgacagcgagttcaaatgcggtgctctacaacacgctgttg
gagctttacatgactcgtgagctcaagagcacgcttcggctgatacccgacacagcaacg
cctagcgctgatgtctcgagcaccaacgcaatgacggagttcccgccggagtcgtacgag
cgccggctagagcaggcgctaacgtttctggaggcacacaagggccgctacgacccctac
caggcgctgtacctcgcccatcaacaccacttccatgacggcatcctgtacctcctccgc
tcgcttgggctctcagaggaggttctcggttactaccgcaccaagctgagcgactccaat
gccgcgccttccgagaggcacgacgcgaccacgaaactcttccaggcgtgtcaggagagt
ccagtatccgacagcagcacgaccgcgatgtggatgacgctgctctcgcagctcgtgcgc
accgccaagacgggggatgtcgacattacgaaggtgctggactacatcgaggcccacgac
gcgctaccgccggtggtggtgttggagatactgagcagcggccctcaaaacactcttgaa
ctgcgcactgtgcgaaactactgccagcgatgtttgctgaagcagacgcagcaggtgcaa
caggtactggcgcagacgtcgcagcgactcggtgcggtggagtgtatcaagaaggagctc
gtcgctctgcagacatcggcggttgtctttcagtccaccacgtgcgcgcactgtcatcaa
ggacttgacactcccgcggtatactttatgtgcaagcacgcctttcaccaccgctgcctc
tatgcaccgaccgagtgcaacatatgcaccgtggcccatcgtcgccagctcgatactatc
agggaggcacaacagcgggacatgcagcggcaagacccgcgcagcttcacggcacagttc
tttcaggacctgaagcgcggcccctacgcggcggaggatgtgtccggtgcgcgagccggt
cctaactggagcgctccacaggacggcttccgtgtggtaacagactacgttgcccgcggt
gtcctcggcgcgccaccgctgtacaaagacgcgagcctcttcgactgcgcgcaagcagcg
cctctctgccccggaggtggtcgtcagcgcggggcgaagggcggcaacgacacggaagac
cttcacatgtggtag
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integrated database retrieval system
