Leishmania orientalis: 92359698
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Entry
92359698 CDS
T10351
Symbol
LSCM4_03768
Name
(RefSeq) hypothetical protein
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
loi Leishmania orientalis
Pathway
loi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92359698 (LSCM4_03768)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loi03019
]
92359698 (LSCM4_03768)
Messenger RNA biogenesis [BR:
loi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
92359698 (LSCM4_03768)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
CSD2
Rrp44_S1
Dis3l2_C_term
OB_HELZ2
OB_RNB
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
92359698
NCBI-ProteinID:
XP_067061701
UniProt:
A0A836HCZ0
LinkDB
All DBs
Position
28:<114442..>117420
Genome browser
AA seq
992 aa
AA seq
DB search
MFTKKRAPIHSVRNNVGSSISTGGGVVTRKDIGCGIVGCSLCAKTAVAGVRDPCILPTAV
IVIPDTNIVLHNMNAMEDYRVQNIILFTTVMSEVQNRNKAIYARLQRLLGDVKKQCFVFA
NDRHEQTHCMRKKGESPNDFNDRAIRVAAQWYARHVAAAFPGTADSSTSCVIVVSHDRAF
KQVMDASEEAQRVSNLRCVSLRDYIKQTIASDSDLLEKIEFEEPEGMKESPSTLQLFTPY
FSTAAMDAGVQDGSLYKGKLRVSETNCFCGEIRGRFEGHTFQRILILGRANMNRAIHDDI
VAVQLLPMSSWRGPRDSPPLPESASEEDAIAAGFSASGKVVGLLFSNRRPFCGSLDEAEV
ERVKTSTSGNVSILFQPKNNRIPRIRITTRHVQDLMDKRLSVVIDDWPLYSSFPVGHYVE
VLGKIGDRDTEATVILLENDVPHYDFSEAVYDCLPKGQWTVTKDEEAKRLDLRDLCIVSV
DPLGCRDIDDALHCRMVNGNHLEVGVHIADVTHFLQEGTAMDQEAAKRSTSVYLVDRRIN
MLPQLLTENLCSLVEAEDRYAFSILWEFDESLNVVRDWFGKTIIRSRGALYYGDAQRMID
DPADTSDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKFKVDNEHVNPTDMQVYQTFE
ANSMIEEWMLYANAAVATKVYESYPQWTLLRRHERPAEGAFDTLNDALHRKLHVRLDDTT
SLTLNKSLDKCEDPGDPYFNKLIRILTTRCLRQAQYFSSGGIPKDEFSHFGLAMPIYTHF
TSPIRRYADVVVHRQLAAAIGIASVSEQSMSTDKMEAVAANLNYRHEQAQRAGRDSQNLF
TGFYLRNFSDGKIPDEEGYVVRVSETHVFVLVPKYGQESRIPREQLETVPVLLDRVKVGI
QLQRQGDVMRTKLVFRLIGMMREGEEGGELVADDEAYEVIEDRKEAAEDVPKATQDTSTT
SEAASGSGSEAVEPSHKRTRVDGLYTAPSVST
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaaagaagcgtgcgcccattcacagtgtgcggaacaacgtcggcagctctatc
agcaccggcggcggcgttgttacccgaaaagatatcggctgcggtatcgtgggctgctcg
ctatgcgccaagacagctgtcgcaggggtaagggatccatgcattctaccgacagccgtc
attgtcatacccgacacgaacattgtgctgcacaacatgaacgccatggaggattatcgc
gtgcagaacatcattctcttcaccaccgtcatgagcgaggtgcagaatcgcaacaaggct
atatacgctcgactgcagcgcctccttggggatgtcaagaagcagtgtttcgtcttcgcg
aatgaccgacatgagcagacgcactgtatgcggaaaaagggggagtcgcccaacgacttc
aatgatcgtgcgattcgggtggcggcccagtggtacgcgcggcacgtggcagccgccttc
ccgggcaccgcagactcatcgacttcctgcgtgattgtcgtctcgcatgatcgggccttc
aagcaagtcatggacgcttcggaggaggcgcagagggtgagcaacttgcgttgcgtatcg
ctgcgtgactacatcaagcaaaccatcgccagcgactcagacttgctggagaagattgag
ttcgaggagccggagggaatgaaagagtcaccgtcgacgctgcagctgttcacgccgtac
ttcagcacggccgccatggacgccggcgtgcaggacgggagcctgtataaaggtaagctg
cgggtcagtgagaccaactgcttctgtggcgagatacgcggcaggtttgagggccacacc
ttccaacgaattctcatattgggccgcgccaatatgaaccgcgcgattcacgacgacatt
gtcgcggtgcagttgctgcctatgtccagctggcggggcccaagagactcaccacccttg
ccagagtcagcgagcgaagaggatgccatagcggccggcttcagtgcgtcaggcaaggtg
gtgggcctactgttctccaaccgccggcctttctgcggcagtctcgacgaggctgaggtg
gagcgggtgaagacgagcacgtctggcaacgtctccatcctgtttcagcccaagaataac
cgaatcccgcgcattcgcatcaccacccgccacgtgcaggacttgatggacaagcgtctg
agcgttgtgattgatgactggcctttgtacagcagctttcctgtcggacattacgtggag
gtgctaggcaagatcggcgatcgcgacacggaggcgacggtcattctcttggagaacgat
gtcccgcattacgacttcagcgaggccgtctacgactgccttccgaaggggcagtggacc
gtgaccaaggatgaagaggcgaagcggttggatttgcgcgacctgtgcatcgtcagcgtg
gacccgctgggctgtcgcgatatcgatgatgcgctgcattgccgcatggtgaacggcaac
cacctcgaggtgggcgtacacatcgccgacgtcacgcacttcctgcaggagggcacggcc
atggaccaggaggcggcgaagcgcagcacgagcgtgtacttggtggaccggcgcatcaac
atgctgccgcagctgctgacggagaacctctgctcgcttgtggaggcggaggaccgctac
gccttttccattctctgggaattcgacgaaagtctgaacgtggtgcgcgactggtttggc
aagacgatcatccgctctcgcggcgctctctactacggcgacgcgcagcgcatgatcgat
gacccggctgacacctctgacattgctgtctccctgcgcgagctgatgcggctaagtaag
cacttcaaggcgcagcgcgagaaggacggcgccctctttctagcatcgcaggagttcaag
tttaaggtggacaacgagcacgtaaacccaaccgacatgcaagtgtaccaaacattcgag
gcgaattcgatgattgaggaatggatgctgtacgccaacgcggcagtggcaacgaaggtg
tacgagtcctacccccaatggacgctgctgcgccgccacgagcggcctgcggaaggcgcg
tttgacacgctgaatgacgcattgcatcgcaagctgcacgtacgcctcgatgataccacc
tcgctgacgctcaacaagtccctcgacaagtgcgaagacccaggagacccgtacttcaac
aagctcattcgcatcctcacgacgagatgtctgcggcaggcccagtacttctccagcggt
ggcatcccgaaagacgagtttagtcacttcggactcgccatgccaatatacacccacttc
acgtcgcccatccgccgctacgctgacgtcgtcgtccatcgtcagctggcggccgccatc
gggatcgccagcgtgagtgagcagagcatgagcacagataagatggaggccgtcgcggca
aatctcaactaccgtcacgagcaggcgcagcgggcaggtcgggactcgcagaacctcttc
actggcttctacctgcgcaacttttcggatgggaagatccctgacgaggagggctacgtg
gtgcgcgtgtcggagactcacgtctttgtgcttgtgccgaagtacggccaggagagtcgt
atcccgcgagagcagctggaaacagtaccagtcttgctggatagagtaaaggtgggcatc
cagctccagcggcagggcgacgtcatgcgcacaaagttagtgttccgtctgatcgggatg
atgcgcgaaggagaagagggtggcgaactcgtggccgacgacgaagcatacgaagtcatc
gaagaccgcaaggaggctgctgaggatgtacccaaggcaactcaggatacgtcaacaaca
tctgaagcggcgagtggcagtggcagtgaagctgtggaaccgtcgcataaacggactcga
gtagacggactctatactgccccctcggtctccacgtag
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