Leishmania orientalis: 92359720
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Entry
92359720 CDS
T10351
Symbol
LSCM4_03790
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
loi Leishmania orientalis
Pathway
loi03440
Homologous recombination
loi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
92359720 (LSCM4_03790)
03450 Non-homologous end-joining
92359720 (LSCM4_03790)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loi03032
]
92359720 (LSCM4_03790)
03400 DNA repair and recombination proteins [BR:
loi03400
]
92359720 (LSCM4_03790)
DNA replication proteins [BR:
loi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
92359720 (LSCM4_03790)
DNA repair and recombination proteins [BR:
loi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
92359720 (LSCM4_03790)
BRCA1-C complex
92359720 (LSCM4_03790)
NHEJ (non-homologous end-joining)
MRX complex
92359720 (LSCM4_03790)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
SbcC_Walker_B
AAA_15
Rad50_zn_hook
AAA_29
ABC_tran
DUF6304
RsgA_GTPase
cobW
Motif
Other DBs
NCBI-GeneID:
92359720
NCBI-ProteinID:
XP_067061723
UniProt:
A0A836GVE5
LinkDB
All DBs
Position
28:complement(195198..199280)
Genome browser
AA seq
1360 aa
AA seq
DB search
MTSIEKLQLCGVRSFDPNPTNQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGAMPPG
SGTEKGSFVYDPKIVGETEVKAQIRLIFIGKGGKLMQVIRSFQATRSAHRVTFTTLDNTV
AFQDSATGEVISSTYRASDVDRVVPEMLGVSPAVLEHVIFCHQEECNWPLGPPKDVKRIF
DDIFAATRYVLALDRLRENSKEFRRQLKEHEASLMALREHREQAKQLEQQIAQKESVVKA
IQSRSTGIEPELRGLRQAREELRLVEEQIETMQREVAVTNGRLEERREAVRRMGAPVTSQ
TLEELLELRSSFATQMQQLEEGLVHDTKRHDAVAARRRAHEEDMYKCRSNVQLLEREAQV
HKQNVAQLRELIQHLSSEYVLSEDNIDERSLQRVLQRAEEAVAAARHRVRAVTESFQERI
QDAEGGVQGVSRARDACNKEMEMREQALESLRRRIKENAAAVSALGGDGCRLQLRQIQAE
VEELQQRVAAAEELRKKGSEGQRGQRILMELEEQNRIVAQLREEMMQQKMLERQQQEIML
LRQQVEESSGAVATALQRDVLPVLLEIGVEAPHEVADDCLSPQTLTSLRNQAAQIQKLKM
EELRSLQTHLLELEKACAIGEQKISYCVDELAQCRQAVDAGTRQCAGLLPNMDAYEEVLL
KAREAAEAAAQRRHAMEVLATCYRDFAVMAKEEKTCAVCERPFDSHESLENFLTRHADKQ
RIRPEALAAVQAAVTAAQDAYHSLEKLQSVVAAVRQHRHRIPILEADLGALEDKMKENRA
EQRKACGARDAAQQVVHQLDTVYEHLCIVCAMGEKTAALRDTLARREKDAEAAQAEQRAQ
ETGRKRASDDGAAARFEPPQRSFDDLSEAYAAATERLHHLNRQFTEAQRMERGQDENAAE
RQLQERKAAMFQAQVAVAKLEDLELAAREQQEEALRHRTRVEELRRQAAEAQRTAEAHQQ
RLLQLRTELQKAEAAERGALETVEEQLRQLQQSLPPVLTYMQNGCIQRLEEVRGHLRDTE
SAYKAAAQEEEELARRMREARQTLSDQHRRSIEMDRHIEALQQEASIAADEAHLAETERT
LASLKSDRLHGVEQLLGEEARQASLATLREMITAKMTSLERIRAQQDGNMEAMLLDVNEL
KQQLRGDKYRNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIA
ELWRQTYRGSDIDTVEIRSETEGTTSIAARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLA
SIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIQARRAVKHFQLVVITH
DEQFVRALGGQSLEKFYYVHKDREGAFSVIDERTFDQLFA
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcatcgagaagttgcagctctgtggtgtgcgcagcttcgacccgaacccgact
aatcagcagtttattcagtttcagaagcccctaacggttattctgggcaagaatggtgct
ggcaaaactaccatcatcgaggcgctgctgaacgcatgtacaggggccatgccgcctggc
agtgggaccgagaaaggctcctttgtgtacgatcccaagatcgttggcgaaacagaggtc
aaggcgcagattcgactcatcttcatcgggaagggcggcaagctgatgcaggtcatccgc
tcttttcaggccacacgcagcgcgcaccgcgtcacctttaccacacttgacaacactgtc
gctttccaggactcggctaccggggaagtgatctcgagcacgtaccgcgccagcgatgtc
gaccgcgtcgtgccagagatgctcggcgtatcgcccgccgtgctggagcatgtgatattt
tgccatcaggaggagtgcaactggccactggggccaccaaaggacgtgaagcgcatcttc
gacgacatcttcgccgccacccggtacgtcctcgcactggaccggctgcgtgagaatagt
aaagaattccgccgtcagctgaaggagcacgaggcaagtcttatggcgctgcgagagcac
cgcgaacaagcgaagcagctggagcagcagattgcgcagaaggaaagtgttgtcaaggcc
attcagagtcgcagcaccggcattgagccagagctgcgaggcttgcgtcaggcacgcgag
gagctgcgcttagtagaggagcagattgaaacaatgcagcgtgaggtggcggtcacgaac
gggcgcctcgaagagcgccgcgaggcggtgcggcggatgggcgcaccggtcacgagtcag
acgctggaggaactgctcgagctgcgcagcagcttcgccacgcagatgcagcagctcgag
gaggggctggtgcacgacaccaagcgccacgacgcggtcgccgctcgacgacgcgctcat
gaggaggatatgtacaagtgccgctcgaacgtgcagctgctggagcgagaggcgcaggtg
cataagcaaaatgtagcgcagctccgtgagcttatccagcacctctccagtgagtacgtc
ctgagcgaggacaacattgatgagcgtagcctgcagcgtgtgctgcagagggcagaggag
gccgtggcggcggcgcgtcaccgtgttcgcgctgtgacggagagctttcaagagcgcatc
caagacgcggagggcggcgtgcagggagtctcgcgcgcgcgagacgcgtgcaacaaggag
atggagatgcgcgagcaagccttggaaagtttacgacgccgcatcaaagagaacgctgcc
gccgtctcggctcttggcggagatggatgccgcttgcagctgagacagattcaggcagag
gtcgaggagctgcagcagcgcgtcgccgccgcggaagagttgcggaagaaaggcagcgaa
gggcagcgcggtcagcgcattttaatggagttagaggagcagaacagaattgtggcccaa
cttcgcgaggagatgatgcaacagaagatgctggaacgccagcagcaggagataatgctg
ctgcgccagcaggtcgaagaatccagtggggccgtggcgacggcgttgcagcgagacgtg
ctcccggttttactagagattggcgtggaagccccacacgaagtggcggatgactgcttg
tcgccgcaaaccctaacatctttgcgcaaccaagccgcccagatacagaagctgaagatg
gaggagctgcgctcgctgcagacacacctgctggagctggagaaggcgtgcgctattggg
gagcagaaaatctcctactgcgtcgatgagctggcccagtgccgccaagcggtggacgcc
ggcaccagacagtgtgccggtcttctccctaacatggacgcgtacgaggaagtgcttctg
aaagctagggaggcagccgaggcggcggcgcagaggcgtcatgccatggaggtcctcgcg
acgtgctaccgtgatttcgcggtaatggcgaaggaggagaagacgtgcgctgtctgcgag
cgcccgtttgacagccacgagtcgctggagaactttctgacgcgacacgcggacaagcag
cgcatccgcccggaggcactagcggctgtgcaggcggccgtcaccgcagcccaggacgcg
tatcatagtcttgagaagctacagagcgttgtggcggctgtacggcagcacaggcaccgc
ataccgatcctggaggccgaccttggcgcgctggaggacaagatgaaggagaaccgtgca
gagcagcgcaaggcctgcggtgcccgtgatgctgcccagcaggtggtgcaccaactggat
accgtgtatgagcacctgtgcatagtgtgcgcaatgggggagaagacagcagcgctgcgc
gatacgttggcgaggagagagaaagacgctgaggcggctcaggcggagcagcgagcgcaa
gagacggggcgcaagcgggccagcgacgacggtgccgcggcgagatttgagccgccgcag
cgctcttttgacgatctttctgaggcctacgcggctgcaacggagcgactgcatcacctc
aacagacagtttaccgaggcccagcggatggagcgtggtcaggacgaaaatgcagcagag
cggcagctacaggagcgcaaggcagcaatgttccaggcgcaggtggcggtggcaaagctg
gaggatctggagttggccgctcgcgagcagcaggaggaagctcttcgtcatcgcactcgg
gtagaagagctgaggcgccaggcagcggaagcgcagcgcaccgcggaggctcatcagcag
cgccttctgcagctccgcactgagcttcagaaggcggaagctgctgagcgcggcgctttg
gagacggtggaggagcagctacgccagctgcagcagtcgctgcccccggtgctcacctac
atgcagaacggctgtatccagcgactggaggaggttagggggcacctgcgcgacacggag
agcgcgtacaaagccgcggctcaggaggaggaagagcttgctcgccggatgagggaagcg
cggcagacactaagtgaccagcaccgccgctccatcgagatggaccgacatatcgaggcc
ctacagcaggaggcgtccatcgcggccgacgaagcgcacctggcggagacggagcgcacc
ctcgcttctctgaagtcggaccgcctgcacggcgtggagcagctgctgggtgaggaggcg
agacaggcgagcctggctactctgcgcgaaatgatcaccgcgaagatgacttcacttgag
aggatacgagcgcagcaggacggcaacatggaggcaatgttgctcgatgtgaatgagctc
aagcagcaactgcgtggcgacaagtaccgaaacatcgagaagcgctaccgctccactttt
ctgaaggtgcaaacgacggagatatcgatccaggacatcgagaagtactacagtgcgctg
gaaaaggcggtgcagtcctaccatcaggagaagattgcgcagatcaaccaaatcattgca
gagctgtggcgccagacataccgcggcagcgatatcgacaccgtggaaattcgttccgag
acagaaggcacgacatcgattgcggcgcggcgcagctacaactaccgcgttgtcatgaag
cggggcaacaatgagatggatatgcgcggtcgctgcagcgctgggcagaaagtgctggcc
tcgatcatcattcggctcgcgctgagcgaagccttctgctgcgactgcggcatcctcgcc
cttgatgagccgacgacaaacctcgatgacgacaatgctcgaagtctggcagacgcactg
cgcactctcattcaggcgcggagggcggtgaagcactttcaactcgtcgtcatcacgcat
gacgagcagtttgtacgtgcgctgggtgggcagtcgctggaaaagttttactatgtccac
aaggatcgcgaaggtgccttctcggtgatcgacgagcgcacgttcgatcagctgtttgca
tga
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integrated database retrieval system