KEGG   Leishmania orientalis: 92359720
Entry
92359720          CDS       T10351                                 
Symbol
LSCM4_03790
Name
(RefSeq) hypothetical protein
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
loi  Leishmania orientalis
Pathway
loi03440  Homologous recombination
loi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:loi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    92359720 (LSCM4_03790)
   03450 Non-homologous end-joining
    92359720 (LSCM4_03790)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:loi03032]
    92359720 (LSCM4_03790)
   03400 DNA repair and recombination proteins [BR:loi03400]
    92359720 (LSCM4_03790)
DNA replication proteins [BR:loi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    92359720 (LSCM4_03790)
DNA repair and recombination proteins [BR:loi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     92359720 (LSCM4_03790)
    BRCA1-C complex
     92359720 (LSCM4_03790)
   NHEJ (non-homologous end-joining)
    MRX complex
     92359720 (LSCM4_03790)
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_21 SbcC_Walker_B AAA_15 Rad50_zn_hook AAA_29 ABC_tran DUF6304 RsgA_GTPase cobW
Other DBs
NCBI-GeneID: 92359720
NCBI-ProteinID: XP_067061723
UniProt: A0A836GVE5
LinkDB
Position
28:complement(195198..199280)
AA seq 1360 aa
MTSIEKLQLCGVRSFDPNPTNQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGAMPPG
SGTEKGSFVYDPKIVGETEVKAQIRLIFIGKGGKLMQVIRSFQATRSAHRVTFTTLDNTV
AFQDSATGEVISSTYRASDVDRVVPEMLGVSPAVLEHVIFCHQEECNWPLGPPKDVKRIF
DDIFAATRYVLALDRLRENSKEFRRQLKEHEASLMALREHREQAKQLEQQIAQKESVVKA
IQSRSTGIEPELRGLRQAREELRLVEEQIETMQREVAVTNGRLEERREAVRRMGAPVTSQ
TLEELLELRSSFATQMQQLEEGLVHDTKRHDAVAARRRAHEEDMYKCRSNVQLLEREAQV
HKQNVAQLRELIQHLSSEYVLSEDNIDERSLQRVLQRAEEAVAAARHRVRAVTESFQERI
QDAEGGVQGVSRARDACNKEMEMREQALESLRRRIKENAAAVSALGGDGCRLQLRQIQAE
VEELQQRVAAAEELRKKGSEGQRGQRILMELEEQNRIVAQLREEMMQQKMLERQQQEIML
LRQQVEESSGAVATALQRDVLPVLLEIGVEAPHEVADDCLSPQTLTSLRNQAAQIQKLKM
EELRSLQTHLLELEKACAIGEQKISYCVDELAQCRQAVDAGTRQCAGLLPNMDAYEEVLL
KAREAAEAAAQRRHAMEVLATCYRDFAVMAKEEKTCAVCERPFDSHESLENFLTRHADKQ
RIRPEALAAVQAAVTAAQDAYHSLEKLQSVVAAVRQHRHRIPILEADLGALEDKMKENRA
EQRKACGARDAAQQVVHQLDTVYEHLCIVCAMGEKTAALRDTLARREKDAEAAQAEQRAQ
ETGRKRASDDGAAARFEPPQRSFDDLSEAYAAATERLHHLNRQFTEAQRMERGQDENAAE
RQLQERKAAMFQAQVAVAKLEDLELAAREQQEEALRHRTRVEELRRQAAEAQRTAEAHQQ
RLLQLRTELQKAEAAERGALETVEEQLRQLQQSLPPVLTYMQNGCIQRLEEVRGHLRDTE
SAYKAAAQEEEELARRMREARQTLSDQHRRSIEMDRHIEALQQEASIAADEAHLAETERT
LASLKSDRLHGVEQLLGEEARQASLATLREMITAKMTSLERIRAQQDGNMEAMLLDVNEL
KQQLRGDKYRNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIA
ELWRQTYRGSDIDTVEIRSETEGTTSIAARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLA
SIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIQARRAVKHFQLVVITH
DEQFVRALGGQSLEKFYYVHKDREGAFSVIDERTFDQLFA
NT seq 4083 nt   +upstreamnt  +downstreamnt
atgacgagcatcgagaagttgcagctctgtggtgtgcgcagcttcgacccgaacccgact
aatcagcagtttattcagtttcagaagcccctaacggttattctgggcaagaatggtgct
ggcaaaactaccatcatcgaggcgctgctgaacgcatgtacaggggccatgccgcctggc
agtgggaccgagaaaggctcctttgtgtacgatcccaagatcgttggcgaaacagaggtc
aaggcgcagattcgactcatcttcatcgggaagggcggcaagctgatgcaggtcatccgc
tcttttcaggccacacgcagcgcgcaccgcgtcacctttaccacacttgacaacactgtc
gctttccaggactcggctaccggggaagtgatctcgagcacgtaccgcgccagcgatgtc
gaccgcgtcgtgccagagatgctcggcgtatcgcccgccgtgctggagcatgtgatattt
tgccatcaggaggagtgcaactggccactggggccaccaaaggacgtgaagcgcatcttc
gacgacatcttcgccgccacccggtacgtcctcgcactggaccggctgcgtgagaatagt
aaagaattccgccgtcagctgaaggagcacgaggcaagtcttatggcgctgcgagagcac
cgcgaacaagcgaagcagctggagcagcagattgcgcagaaggaaagtgttgtcaaggcc
attcagagtcgcagcaccggcattgagccagagctgcgaggcttgcgtcaggcacgcgag
gagctgcgcttagtagaggagcagattgaaacaatgcagcgtgaggtggcggtcacgaac
gggcgcctcgaagagcgccgcgaggcggtgcggcggatgggcgcaccggtcacgagtcag
acgctggaggaactgctcgagctgcgcagcagcttcgccacgcagatgcagcagctcgag
gaggggctggtgcacgacaccaagcgccacgacgcggtcgccgctcgacgacgcgctcat
gaggaggatatgtacaagtgccgctcgaacgtgcagctgctggagcgagaggcgcaggtg
cataagcaaaatgtagcgcagctccgtgagcttatccagcacctctccagtgagtacgtc
ctgagcgaggacaacattgatgagcgtagcctgcagcgtgtgctgcagagggcagaggag
gccgtggcggcggcgcgtcaccgtgttcgcgctgtgacggagagctttcaagagcgcatc
caagacgcggagggcggcgtgcagggagtctcgcgcgcgcgagacgcgtgcaacaaggag
atggagatgcgcgagcaagccttggaaagtttacgacgccgcatcaaagagaacgctgcc
gccgtctcggctcttggcggagatggatgccgcttgcagctgagacagattcaggcagag
gtcgaggagctgcagcagcgcgtcgccgccgcggaagagttgcggaagaaaggcagcgaa
gggcagcgcggtcagcgcattttaatggagttagaggagcagaacagaattgtggcccaa
cttcgcgaggagatgatgcaacagaagatgctggaacgccagcagcaggagataatgctg
ctgcgccagcaggtcgaagaatccagtggggccgtggcgacggcgttgcagcgagacgtg
ctcccggttttactagagattggcgtggaagccccacacgaagtggcggatgactgcttg
tcgccgcaaaccctaacatctttgcgcaaccaagccgcccagatacagaagctgaagatg
gaggagctgcgctcgctgcagacacacctgctggagctggagaaggcgtgcgctattggg
gagcagaaaatctcctactgcgtcgatgagctggcccagtgccgccaagcggtggacgcc
ggcaccagacagtgtgccggtcttctccctaacatggacgcgtacgaggaagtgcttctg
aaagctagggaggcagccgaggcggcggcgcagaggcgtcatgccatggaggtcctcgcg
acgtgctaccgtgatttcgcggtaatggcgaaggaggagaagacgtgcgctgtctgcgag
cgcccgtttgacagccacgagtcgctggagaactttctgacgcgacacgcggacaagcag
cgcatccgcccggaggcactagcggctgtgcaggcggccgtcaccgcagcccaggacgcg
tatcatagtcttgagaagctacagagcgttgtggcggctgtacggcagcacaggcaccgc
ataccgatcctggaggccgaccttggcgcgctggaggacaagatgaaggagaaccgtgca
gagcagcgcaaggcctgcggtgcccgtgatgctgcccagcaggtggtgcaccaactggat
accgtgtatgagcacctgtgcatagtgtgcgcaatgggggagaagacagcagcgctgcgc
gatacgttggcgaggagagagaaagacgctgaggcggctcaggcggagcagcgagcgcaa
gagacggggcgcaagcgggccagcgacgacggtgccgcggcgagatttgagccgccgcag
cgctcttttgacgatctttctgaggcctacgcggctgcaacggagcgactgcatcacctc
aacagacagtttaccgaggcccagcggatggagcgtggtcaggacgaaaatgcagcagag
cggcagctacaggagcgcaaggcagcaatgttccaggcgcaggtggcggtggcaaagctg
gaggatctggagttggccgctcgcgagcagcaggaggaagctcttcgtcatcgcactcgg
gtagaagagctgaggcgccaggcagcggaagcgcagcgcaccgcggaggctcatcagcag
cgccttctgcagctccgcactgagcttcagaaggcggaagctgctgagcgcggcgctttg
gagacggtggaggagcagctacgccagctgcagcagtcgctgcccccggtgctcacctac
atgcagaacggctgtatccagcgactggaggaggttagggggcacctgcgcgacacggag
agcgcgtacaaagccgcggctcaggaggaggaagagcttgctcgccggatgagggaagcg
cggcagacactaagtgaccagcaccgccgctccatcgagatggaccgacatatcgaggcc
ctacagcaggaggcgtccatcgcggccgacgaagcgcacctggcggagacggagcgcacc
ctcgcttctctgaagtcggaccgcctgcacggcgtggagcagctgctgggtgaggaggcg
agacaggcgagcctggctactctgcgcgaaatgatcaccgcgaagatgacttcacttgag
aggatacgagcgcagcaggacggcaacatggaggcaatgttgctcgatgtgaatgagctc
aagcagcaactgcgtggcgacaagtaccgaaacatcgagaagcgctaccgctccactttt
ctgaaggtgcaaacgacggagatatcgatccaggacatcgagaagtactacagtgcgctg
gaaaaggcggtgcagtcctaccatcaggagaagattgcgcagatcaaccaaatcattgca
gagctgtggcgccagacataccgcggcagcgatatcgacaccgtggaaattcgttccgag
acagaaggcacgacatcgattgcggcgcggcgcagctacaactaccgcgttgtcatgaag
cggggcaacaatgagatggatatgcgcggtcgctgcagcgctgggcagaaagtgctggcc
tcgatcatcattcggctcgcgctgagcgaagccttctgctgcgactgcggcatcctcgcc
cttgatgagccgacgacaaacctcgatgacgacaatgctcgaagtctggcagacgcactg
cgcactctcattcaggcgcggagggcggtgaagcactttcaactcgtcgtcatcacgcat
gacgagcagtttgtacgtgcgctgggtgggcagtcgctggaaaagttttactatgtccac
aaggatcgcgaaggtgccttctcggtgatcgacgagcgcacgttcgatcagctgtttgca
tga

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