Leishmania orientalis: 92360049
Help
Entry
92360049 CDS
T10351
Symbol
LSCM4_04126
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
loi Leishmania orientalis
Pathway
loi03030
DNA replication
loi03410
Base excision repair
loi03420
Nucleotide excision repair
loi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
92360049 (LSCM4_04126)
03410 Base excision repair
92360049 (LSCM4_04126)
03420 Nucleotide excision repair
92360049 (LSCM4_04126)
03430 Mismatch repair
92360049 (LSCM4_04126)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loi03032
]
92360049 (LSCM4_04126)
03036 Chromosome and associated proteins [BR:
loi03036
]
92360049 (LSCM4_04126)
03400 DNA repair and recombination proteins [BR:
loi03400
]
92360049 (LSCM4_04126)
DNA replication proteins [BR:
loi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
92360049 (LSCM4_04126)
DNA Replication Termination Factors
ELG1-RFC complex
92360049 (LSCM4_04126)
Chromosome and associated proteins [BR:
loi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
92360049 (LSCM4_04126)
DNA repair and recombination proteins [BR:
loi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
92360049 (LSCM4_04126)
Check point factors
HRAD17(Rad24)-RFC complex
92360049 (LSCM4_04126)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
AAA_16
Mg_chelatase
RCF1-5-like_lid
RuvB_N
AAA_assoc_2
AAA_19
AAA_30
AAA_11
AAA_24
nSTAND3
DNAX_ATPase_lid
AAA_5
RNA_helicase
AAA_18
AAA_25
DEAD
SLFN-g3_helicase
AAA_14
DUF434
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
92360049
NCBI-ProteinID:
XP_067062052
UniProt:
A0A836GKP2
LinkDB
All DBs
Position
27:230597..231679
Genome browser
AA seq
360 aa
AA seq
DB search
MNTASTPWVEKYRPQTVSDIVGNTEAISRLQVIAREGNLPNLLLCGPPGTGKTTSMLCLA
RDLLLQSTDTASVGSSPGGAMKDILKEAVLELNASDDRGLDVVREKIKLFAQTKKTLPKK
YFSTGDGATREEQVVHLHKIVLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSKI
IEPIQSRCAVVRFKKLSDADILKRLVYVIQQENVSYTDDGLEALLYLAEGDLRQALNALQ
ATHTGYGLVNADNVFKVCDQPHPVLVENIITACITKRNIEEAHKEMNRLLNRGYAPVDVI
STFFKVVQTNARLFRSELQQLEVLKIVGETTMRIAEGVGTSLQLAAMLARMINAVESAPS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgccagcacgccgtgggtggaaaagtaccgcccacagacggtgtcagacatt
gtcggtaataccgaggcgatttcgcgtttgcaggtgattgcgagggaaggcaatttgccc
aacttactcctttgtggacctcccggcaccggcaagaccacaagtatgctctgcctcgcg
cgcgatctgctgcttcagagcaccgacaccgctagtgtgggatcgtcgcccggtggggcc
atgaaggatatccttaaggaggcggtgctggaactgaacgccagtgacgaccgcggattg
gacgttgtgcgcgagaagatcaagctcttcgctcaaacgaaaaagacgctgcccaaaaag
tatttctccacaggcgatggggccaccagagaggagcaggtggtgcacctgcacaagatt
gtgttgctggatgaggcagatagcatgaccccagctgcgcagcaggccttgcgtcgcaca
atggaactccacagcagcacgacgcggtttgcatttgcgtgcaacaacagtagtaagatc
atcgagccgattcagtctcgctgtgctgttgtccgcttcaagaagctcagcgacgcagac
attttgaagcgactcgtgtacgtcatacagcaggaaaatgtctcctacaccgatgatggg
ctggaggcgctcctctatctcgccgagggcgacctgcggcaggcactgaatgcgcttcag
gccacacacactggctacggactcgtgaacgcagacaatgtcttcaaggtgtgcgaccag
ccgcatccggtgctcgtcgagaacatcatcacggcgtgcatcacgaagcgcaatattgaa
gaggcgcacaaggagatgaatcgactgctcaaccgaggctacgcgcctgtcgacgtgatt
tccaccttcttcaaagtggttcagacaaatgcccgtctttttcgcagtgagctgcagcag
ctggaggtgctcaaaatagtgggggaaacgacgatgcgcatcgcggaaggtgtgggcacc
tcgctgcagctcgctgcgatgcttgcacggatgatcaacgcggtggagagcgctccatca
tag
DBGET
integrated database retrieval system
