Leishmania orientalis: 92360232
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Entry
92360232 CDS
T10351
Symbol
LSCM4_04311
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
loi Leishmania orientalis
Pathway
loi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
92360232 (LSCM4_04311)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loi03021
]
92360232 (LSCM4_04311)
03019 Messenger RNA biogenesis [BR:
loi03019
]
92360232 (LSCM4_04311)
Transcription machinery [BR:
loi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
92360232 (LSCM4_04311)
RNA polymerase I system
92360232 (LSCM4_04311)
Messenger RNA biogenesis [BR:
loi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
92360232 (LSCM4_04311)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW1_SPT5
KOW4_SPT5
KOWx_SPT5
KOW
KOW2_Spt5
DUF357
Motif
Other DBs
NCBI-GeneID:
92360232
NCBI-ProteinID:
XP_067062235
UniProt:
A0A836GXL5
LinkDB
All DBs
Position
27:complement(<991127..>993223)
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AA seq
698 aa
AA seq
DB search
MTEEVNYDELADLLASNAVVMSEAAEVVAGEQEGDRPREPQKHKKEKHKKHKKRPRKELD
NGESSDDERLKSKYVLDAAESGDSDDDDELSDADFVDDDEVEDANYGDRPKRYIFHEGDD
EKSVDEMARYYEEADRHYRRHGDNEDALLTRGDLSSRRLASQFLPREDDPKVFAVKCRPR
MSRVLVTRIVNKCYAYRVGRNYERKKVDLGIISVFALDHVKEYIYVEASRKRFVENVLSG
LDGIFRFNIAVVDPKELLQTMETRPSTHKVRVGDYVRLRQRFYRGDLAQVTALHPDGIYI
TCKVVPREDFVHKPFNRATKRLEPRFFTPRQAMGVREMENSYVWGDLHFDREGYLLKTVS
ARMVVSGAQMEQPSTEELARFYNDQREKVERALKIAEAAAQVAPISIGDSVRVMTGQLRN
TIGVVENVFTNTNTAVLTCTVSGRTQPIKVQVELSACTKHFSEGVHVVVERGEHAGESGT
VVKSWGSIVLLFPDRAAVGAELKVEANDCHQSKLGSISVHSKGMWQLFDLVSITEPNCVG
CIVRLNRNDVDVLTENNDVRTLSYAQVNAVGRDTRQTTDGRDNTLSRGAEVHIQKHPWTP
IGLEGQTGRIEHIFHRTVFVRCRASPLHANIVALKAECVLLIGGRKTTRRAAPTQEVAPG
RSVGQYAADAVRLSAGQSRDSELWDESSMIENNASAMV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaggttaactatgacgagctggcggacttgctggcgtcgaatgcggtcgtt
atgagtgaggctgctgaggtcgtggctggagaacaggagggcgacaggccgagagagccc
cagaagcacaagaaggagaagcacaagaagcacaaaaaacggccacggaaggagttggac
aatggggagtcctctgatgacgagcgactcaagtctaagtacgtcctagacgctgcagag
agcggcgactccgatgacgatgatgagctgtctgacgcagattttgtcgatgatgatgag
gtcgaggacgccaactacggtgatcgcccgaagagatatattttccacgaaggcgacgac
gagaaaagcgtggatgaaatggctcgctactacgaagaggctgatcgacactaccgcagg
cacggggacaacgaagatgcactactgacacgtggcgacttgtcctcgcgtcgccttgcc
tcgcagtttctgccacgcgaggacgacccgaaggtgtttgctgtcaagtgccgccctcgc
atgtcacgggtgctagtgacacgcattgtgaacaagtgctacgcttaccgtgtagggcgc
aactatgagcgcaagaaggtcgacctcggcatcatctccgtcttcgcgctggatcatgtg
aaggagtacatctacgttgaggcaagtcgcaagcgcttcgtggaaaacgtgctcagcgga
ctcgatggcatcttccgctttaacatcgctgtggtagacccgaaggagcttctgcagaca
atggagacgcgtccgtccacccacaaagtgcgtgttggcgactacgtacgcctgcgccag
cgcttttatcgcggcgaccttgctcaggtgacggcgctgcacccggacggtatctacatc
acgtgcaaggtggttcctcgcgaggactttgtgcacaaaccattcaatagggcgacgaag
cgactggagcctcgcttctttacgccacgacaggcgatgggggtgcgagagatggagaac
tcatacgtgtggggcgatctgcactttgaccgggagggctatctcctcaagactgtttcg
gcgcgtatggtggtatctggagcgcagatggagcagcccagtacagaggagctcgctcga
ttctacaatgatcagcgcgaaaaggtggagagggcccttaagatagcggaggcggctgcg
caggtggcgcccatcagcattggcgactccgttcgtgtgatgacagggcaactgcgcaac
actattggagtggtggaaaacgtcttcaccaacacgaacacggccgtgctcacatgcaca
gtctctggccgcacgcagcccatcaaggtgcaggtagagcttagcgcctgcacgaagcat
ttctccgagggggtgcacgttgtcgtggagcgcggtgaacacgctggtgagtccggcaca
gtggtcaagtcctggggcagcatcgtgctgctgtttccggaccgtgccgctgttggggcg
gagcttaaggtcgaggcgaacgactgtcaccagagcaagctggggagcatctcggtgcac
tcgaagggtatgtggcagctttttgatctcgtctctatcacggagccaaactgcgtcggc
tgcatcgtgcgcctgaatcgaaacgatgtggatgtgctgacggaaaacaacgacgtgcgc
acgttgtcatacgcgcaggtgaacgcggtagggcgtgacacacgccagacaacggacggc
cgcgacaacacgctttcgagaggggcggaggtgcacatccagaagcacccatggacgccg
atcggcctggaaggacagacgggccgcattgagcacatcttccatcggacagtctttgtg
cgctgccgtgcatcgccgctccatgcaaatatagtggcactgaaggcagagtgcgtgctc
ctcattggtggtcgcaagacgactcgtcgcgctgcaccaacgcaggaggtggcgcctgga
aggagcgtaggccagtacgccgcagatgcggttcgtctctccgctgggcagagccgcgac
tcagagctgtgggacgagagctcgatgatagagaataatgcatctgcgatggtgtag
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