KEGG   Leishmania orientalis: 92360251
Entry
92360251          CDS       T10351                                 
Symbol
LSCM4_04331
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
loi  Leishmania orientalis
Pathway
loi03040  Spliceosome
loi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:loi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92360251 (LSCM4_04331)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    92360251 (LSCM4_04331)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:loi03041]
    92360251 (LSCM4_04331)
   04121 Ubiquitin system [BR:loi04121]
    92360251 (LSCM4_04331)
   03400 DNA repair and recombination proteins [BR:loi03400]
    92360251 (LSCM4_04331)
Enzymes [BR:loi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     92360251 (LSCM4_04331)
Spliceosome [BR:loi03041]
 Complex B
  Other components
   Prp19 complex
    92360251 (LSCM4_04331)
 Complex C
   Prp19-CDC5 complex
    92360251 (LSCM4_04331)
Ubiquitin system [BR:loi04121]
 Ubiquitin ligases (E3)
  U-box type E3
   92360251 (LSCM4_04331)
DNA repair and recombination proteins [BR:loi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    92360251 (LSCM4_04331)
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EIPR1 WD40_RFWD3 zf-Nse DSE1_N U-box Beta-prop_VPS8 Beta-prop_SPT8 PALB2_WD40 Beta-prop_TEP1_C Phage_tube
Other DBs
NCBI-GeneID: 92360251
NCBI-ProteinID: XP_067062254
UniProt: A0A836KIQ9
LinkDB
Position
27:<1093538..>1095073
AA seq 511 aa
MLRCNISQRVPTHPVVSIKSGLVFERSLVEKYIDEHGRCPVTGDALCRQDLIAAQGAVPD
ASIAASGSLGAASVPTLLERLQTEWEGVALEQFSLRQQVTQLQLELAHALQQYDAACRVI
ARLSKELDTLRGGKALAAEEADEGAAAVVVPVAVLRRMDIAEAAERQARRQRKAAAAESV
AVAPSQLTEEAQWVATPSLSASASSVRSAVRVAAAADDSSSGIFASAVTGDHAVVRYSPD
SFSEEARGVGHTAAVHTLASQPGGVLLSAAEDQTVRVWSTKGTALTVMHTLRYASGVAAM
SQRTVGGAYVLCGAADGVLTLSDLESGTHVVATAPLTSDAASRALTCVELHPYASLAAVA
LQPSELQLWDAREMRADTVISHVRGATPRTHICSASFSADCVSLAAGLTDGSTYVWDLRQ
VLAPVAVLPPSTDAIPATVRYAPDGLCLVVGGHGVNLYDCARLSASMEATATAALRAGAV
CDVCWTTNGTGVLSGAVDGIVRLYSTVPGAV
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgctgcgctgcaacatctctcagcgggtgccgacgcacccggtggtatctataaagtcg
gggctcgtctttgagcgcagcctcgtcgagaagtatattgacgaacatggccgatgcccc
gtcaccggggatgcgctgtgcaggcaggacctcatagccgcccagggcgctgttccagat
gcgtccatcgcggccagtggcagtcttggggctgcctccgtccctacgcttctggagcgc
ctccagacggagtgggagggggtggcgctggagcagtttagcctccggcagcaggtaacc
cagctgcagttggagctggcccacgcattacagcagtacgacgccgcctgcagggtgatt
gcgcgactcagcaaggagcttgacaccctccgaggaggcaaagctctggctgccgaggag
gccgacgagggcgcagctgcggtggtggtgccggtggcggtgctgcgacgcatggacata
gctgaggcagcggagcgtcaggcacgcagacaacgcaaggcggcggcggccgaatctgtg
gcggtcgcaccgtcgcagctcacggaggaggcgcagtgggtggccacaccatcgttatca
gcctctgcatcgtcggtgcgctcggccgtgcgtgttgcagcggcagcggacgacagcagt
tcgggcatcttcgctagcgccgtcacgggcgatcacgcggttgtgcggtacagccctgac
agcttcagcgaggaagcgcgtggtgtagggcacaccgctgccgtgcacacgctggcgagt
cagccgggcggcgtcctactctccgctgcggaggatcagacggtgcgcgtgtggtcgacg
aagggcactgcgctgacggttatgcacacgctgcggtatgcgagcggagtggctgcgatg
agtcagcggactgtgggtggggcttatgtgctctgcggcgccgcggatggtgttctcacc
ctctccgacttggagagcggcacacacgttgtggcgacggcgccgctgacgagcgatgcg
gcgtcgcgggcgctgacgtgcgtggagcttcacccatacgcatctcttgcggccgtggct
ctccagccgagtgagctacagctctgggatgcgcgtgagatgcgcgccgacaccgtgatt
tcccacgtgcgaggcgctactccgcgtacgcacatctgcagcgccagctttagtgccgac
tgtgtgtccctcgcggctggcctcacggatggctcgacgtacgtctgggacctccgccag
gtgctggccccagtagcagtgctaccgcccagcactgacgctatcccagccacggtgcgc
tacgccccagacggactctgtctcgtcgttggcggacacggcgtaaatttatacgactgc
gcacgcctgtccgcctcgatggaggccactgcaacggcagcacttcgggcgggtgccgtg
tgcgacgtgtgctggacgacgaatggcacgggcgtgctgagcggcgccgtcgacggcatc
gtgcgcctgtactccaccgtacccggtgcagtgtag

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