KEGG   Leishmania orientalis: 92360304
Entry
92360304          CDS       T10351                                 
Symbol
LSCM4_04385
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
loi  Leishmania orientalis
Pathway
loi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:loi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    92360304 (LSCM4_04385)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:loi03009]
    92360304 (LSCM4_04385)
Ribosome biogenesis [BR:loi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    92360304 (LSCM4_04385)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Utp13 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st EIF3I ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_VPS8 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_ACSF4 Beta-prop_NWD2_C Utp12 Beta-prop_IFT122_2nd Beta-prop_DCAF12 Beta-prop_LRRK2 Beta-prop_IFT140_2nd VPS8_N UTP15_C
Other DBs
NCBI-GeneID: 92360304
NCBI-ProteinID: XP_067062579
UniProt: A0A836H903
LinkDB
Position
25:complement(<203673..>206717)
AA seq 1014 aa
MEGKNCFRTRWTQEPIFSGGALASLALPVSASAASPALSTSDALEECLVMACGDTVNVVR
ATTGEVLCTYKLPVEDVVLHIDAVTVPEVATDEGKGAAGADDGEAPAASTTGSAKKPSVA
KKIPKEKTGKDVRLKEEEEYAGQVGGKVGALSATPPSSGVAASQNGRELAAPAGSYIAVG
TRALQVYVLRVDARVEPHTLFSSSRLREQGAAADATAESSSAAVAEGDDGGAADAESGTA
PLVQYAMVLQRNWTAAQHAISVVHFSPSGTHLLSGATDGTVKVWNVFHHHLTHNLACAHS
SLVQSVCLDPSEAYLAVGSFEGHITVFDFVTKRMVAAGRPHVQAVESITFNEELTHVYSI
ARDRRLAMNKIMFSESRKSSELKEVRAIVVKEHVSSAAFDSAGLLHVGAMDGVVSTYRVS
ESEAVQLVRRLPKPPASDAEDNAEEAFVRSLLVAGRPKGTAMRQRRGFGAHDAPQVSDTS
SLYVGDAGFNIQYLVPSMAERSQYDVMRTIVGFLDQLLDVKLFPEASPLHRAVVTNSKDV
RLYASDGCVSSKTLRGHSDVVLCCAVSSDGAWIATGAKDKEVRVWSTERCETVLRGVGGH
TAEVTSLSFNGKQTDTYLLLFSVSSDENLRMWDIGVPLAEHTSAKRPQSRVEEIQHRSGV
NAAHSGPIYTVAVAPNDQYVATGGKDKSVNVWNITGKRIYREGSLKGHRRGVSSLAFSPV
DRLLASASNDGSVRLWSLVSLTCLKAMQVDRTSVLQLSFFNNGTQIVTGNAEGVLRVWAI
TSSESVWSAEAHTEKIWALAVEERASSGETIFYSGAADGVFVATEDYTAEEVARVKEERH
SMILQEQALANALRKGAFSEAFMLALRLSHPRHLRQVLVRWCAKDARQCESTLRGELLPG
LDTEQMTRLLQYTREWITNSRHCMVATLVLYVLISSRHFEAVAQVPSMASLIEPLLAHTR
KHSQRQHDLLRRTYYIDYVIRGLAPDALTSLPPFVYRDGGQNEESPLTKRVRAE
NT seq 3045 nt   +upstreamnt  +downstreamnt
atggaggggaagaactgcttccgcacgagatggacgcaggagcccatctttagtggcggc
gcgctggcctctctggcgcttccagtctccgcttccgcagcttcgcccgcactttccacg
tcagacgctctggaagagtgcctcgtgatggcgtgcggcgacaccgtgaacgtcgtgcgt
gcaaccactggcgaggtgctgtgcacgtataagctaccggtagaggacgtggttcttcac
atcgacgccgtgacggtgcctgaggttgccaccgatgagggcaaaggtgccgccggcgcg
gatgacggagaggcgccagcggctagcaccaccggctcagccaagaagccgtccgtggcg
aagaagatcccgaaggagaagacgggcaaagacgtcaggcttaaagaggaggaggagtat
gccgggcaagtgggggggaaggtgggcgcgctatccgcgacgccgccctccagcggcgtc
gccgcttctcagaacggcagggagctcgctgctccggctggcagctacattgcggtcggc
acgcgcgccctgcaggtctacgtgctgcgcgtcgacgctcgcgttgagccgcacacattg
ttctcgtcctctcgtctaagggagcagggtgctgctgctgatgcgactgctgagagtagc
agcgctgctgtggctgagggcgatgatggtggtgcagctgacgcggaatccggtaccgcg
cctctggtgcagtacgcgatggtgctgcagcgcaactggacggccgcgcagcacgccatc
tctgtcgtgcacttttcccccagtggcacgcacctcctctcgggtgctacggatggtact
gtgaaggtgtggaacgtctttcaccatcacctcacccacaacttggcgtgtgctcacagc
tcgctcgtgcagagcgtttgcctcgatcccagcgaggcctacctcgccgtcggctccttc
gaggggcacatcacggtcttcgactttgtgacgaagcggatggtcgcggcagggcggccg
cacgtgcaggcagtagagtccatcaccttcaatgaggagctgacgcacgtctactcgatc
gccagggatcgccgtctcgctatgaacaagataatgttcagcgaaagccgcaagtcgtcg
gagttgaaggaggtgcgcgcgattgtggtgaaggagcacgtgtcgagcgccgccttcgac
agcgctgggctgcttcacgttggtgcaatggacggcgtggtcagcacctaccgcgtgagc
gagagcgaggctgtgcagctcgtgcgccgacttccaaagccgccggcctcggacgccgag
gacaatgctgaggaggcgtttgtgcgctctcttctggtggcgggcaggccgaaaggcacg
gccatgcgccagcggcgcggctttggggcgcatgatgcgccgcaggtgtcagacacctcc
tccctgtacgttggcgatgcgggatttaacattcagtacctcgtcccgtcgatggcggag
cgcagtcagtacgacgtcatgcgcaccattgtcggcttcttggatcagttgctcgacgtg
aagctgttccctgaggcctcgccactgcaccgcgctgtggtgaccaacagcaaggatgtg
cgcctgtacgcctcggacgggtgcgtttcgtcgaagacgctgcgtggccacagcgacgta
gtgctctgctgtgccgtgagcagtgacggggcgtggattgccaccggggcaaaggataag
gaggtgcgtgtttggtcgaccgagaggtgcgagaccgttttgcgtggtgttggcgggcac
acggctgaggtgacgtccctatccttcaatgggaagcagacggacacgtacctgttgctt
ttctctgtctccagcgacgagaatctgcgcatgtgggacattggcgtccccctggcggag
cacacttcggcgaagcgcccgcagtcacgtgtggaggagatacagcaccgtagtggcgtg
aatgcggcccacagcggccctatctacacggtggctgtcgcgcccaacgaccagtacgtc
gcgaccggcggtaaggataagtcggtgaatgtgtggaacattaccggcaagaggatctac
cgcgaaggctccctgaaaggccaccggcgcggcgtctcgtctctcgcgttctcgcctgtc
gatcgcctcctggcatcggcctcgaatgacgggtcggtgcggctgtggtcgctggtgtcg
ctgacatgcctgaaggcgatgcaggtggaccgcacgtcggtgctgcagctgagcttcttc
aacaacggcacgcagatcgtgacaggtaacgccgagggcgtgctgcgtgtctgggccatc
acatcctcggagtcggtctggtcggcggaggcgcacacggagaagatatgggctttggcg
gtcgaggagcgcgcctcctcgggcgagacgattttctactccggcgccgccgacggcgtt
ttcgttgcgacggaggactacaccgccgaggaggtggcccgcgtgaaggaggagcggcac
agcatgattctgcaggagcaggcgcttgccaatgcccttcgcaagggcgcattctcagag
gcgttcatgctggccctgcggctgagtcatccgcgccacctccgtcaggtgcttgttcga
tggtgtgccaaggacgcgcgccagtgcgagagcacgcttcgcggggagcttctgcccggc
cttgacaccgagcagatgacacggctgctgcagtatacgcgagagtggatcacgaacagc
cgtcactgcatggtggccactctggtgctttacgtgctaatatcttcacgccactttgag
gcagtcgcgcaggtgccgtcgatggcgtcactgattgagccgctgttagcccacacgcgc
aaacacagccagcgccagcacgaccttcttcggcgcacctactatatcgactacgtcatc
cgcggccttgccccggacgccctgacgtcgctacctccattcgtgtatcgagatggcggc
caaaatgaggagtcgccactgaccaagcgcgtgcgcgccgagtga

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