Leishmania orientalis: 92360304
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Entry
92360304 CDS
T10351
Symbol
LSCM4_04385
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
loi Leishmania orientalis
Pathway
loi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
92360304 (LSCM4_04385)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loi03009
]
92360304 (LSCM4_04385)
Ribosome biogenesis [BR:
loi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
92360304 (LSCM4_04385)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_VPS8
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_ACSF4
Beta-prop_NWD2_C
Utp12
Beta-prop_IFT122_2nd
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_IFT140_2nd
VPS8_N
UTP15_C
Motif
Other DBs
NCBI-GeneID:
92360304
NCBI-ProteinID:
XP_067062579
UniProt:
A0A836H903
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All DBs
Position
25:complement(<203673..>206717)
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AA seq
1014 aa
AA seq
DB search
MEGKNCFRTRWTQEPIFSGGALASLALPVSASAASPALSTSDALEECLVMACGDTVNVVR
ATTGEVLCTYKLPVEDVVLHIDAVTVPEVATDEGKGAAGADDGEAPAASTTGSAKKPSVA
KKIPKEKTGKDVRLKEEEEYAGQVGGKVGALSATPPSSGVAASQNGRELAAPAGSYIAVG
TRALQVYVLRVDARVEPHTLFSSSRLREQGAAADATAESSSAAVAEGDDGGAADAESGTA
PLVQYAMVLQRNWTAAQHAISVVHFSPSGTHLLSGATDGTVKVWNVFHHHLTHNLACAHS
SLVQSVCLDPSEAYLAVGSFEGHITVFDFVTKRMVAAGRPHVQAVESITFNEELTHVYSI
ARDRRLAMNKIMFSESRKSSELKEVRAIVVKEHVSSAAFDSAGLLHVGAMDGVVSTYRVS
ESEAVQLVRRLPKPPASDAEDNAEEAFVRSLLVAGRPKGTAMRQRRGFGAHDAPQVSDTS
SLYVGDAGFNIQYLVPSMAERSQYDVMRTIVGFLDQLLDVKLFPEASPLHRAVVTNSKDV
RLYASDGCVSSKTLRGHSDVVLCCAVSSDGAWIATGAKDKEVRVWSTERCETVLRGVGGH
TAEVTSLSFNGKQTDTYLLLFSVSSDENLRMWDIGVPLAEHTSAKRPQSRVEEIQHRSGV
NAAHSGPIYTVAVAPNDQYVATGGKDKSVNVWNITGKRIYREGSLKGHRRGVSSLAFSPV
DRLLASASNDGSVRLWSLVSLTCLKAMQVDRTSVLQLSFFNNGTQIVTGNAEGVLRVWAI
TSSESVWSAEAHTEKIWALAVEERASSGETIFYSGAADGVFVATEDYTAEEVARVKEERH
SMILQEQALANALRKGAFSEAFMLALRLSHPRHLRQVLVRWCAKDARQCESTLRGELLPG
LDTEQMTRLLQYTREWITNSRHCMVATLVLYVLISSRHFEAVAQVPSMASLIEPLLAHTR
KHSQRQHDLLRRTYYIDYVIRGLAPDALTSLPPFVYRDGGQNEESPLTKRVRAE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaagaactgcttccgcacgagatggacgcaggagcccatctttagtggcggc
gcgctggcctctctggcgcttccagtctccgcttccgcagcttcgcccgcactttccacg
tcagacgctctggaagagtgcctcgtgatggcgtgcggcgacaccgtgaacgtcgtgcgt
gcaaccactggcgaggtgctgtgcacgtataagctaccggtagaggacgtggttcttcac
atcgacgccgtgacggtgcctgaggttgccaccgatgagggcaaaggtgccgccggcgcg
gatgacggagaggcgccagcggctagcaccaccggctcagccaagaagccgtccgtggcg
aagaagatcccgaaggagaagacgggcaaagacgtcaggcttaaagaggaggaggagtat
gccgggcaagtgggggggaaggtgggcgcgctatccgcgacgccgccctccagcggcgtc
gccgcttctcagaacggcagggagctcgctgctccggctggcagctacattgcggtcggc
acgcgcgccctgcaggtctacgtgctgcgcgtcgacgctcgcgttgagccgcacacattg
ttctcgtcctctcgtctaagggagcagggtgctgctgctgatgcgactgctgagagtagc
agcgctgctgtggctgagggcgatgatggtggtgcagctgacgcggaatccggtaccgcg
cctctggtgcagtacgcgatggtgctgcagcgcaactggacggccgcgcagcacgccatc
tctgtcgtgcacttttcccccagtggcacgcacctcctctcgggtgctacggatggtact
gtgaaggtgtggaacgtctttcaccatcacctcacccacaacttggcgtgtgctcacagc
tcgctcgtgcagagcgtttgcctcgatcccagcgaggcctacctcgccgtcggctccttc
gaggggcacatcacggtcttcgactttgtgacgaagcggatggtcgcggcagggcggccg
cacgtgcaggcagtagagtccatcaccttcaatgaggagctgacgcacgtctactcgatc
gccagggatcgccgtctcgctatgaacaagataatgttcagcgaaagccgcaagtcgtcg
gagttgaaggaggtgcgcgcgattgtggtgaaggagcacgtgtcgagcgccgccttcgac
agcgctgggctgcttcacgttggtgcaatggacggcgtggtcagcacctaccgcgtgagc
gagagcgaggctgtgcagctcgtgcgccgacttccaaagccgccggcctcggacgccgag
gacaatgctgaggaggcgtttgtgcgctctcttctggtggcgggcaggccgaaaggcacg
gccatgcgccagcggcgcggctttggggcgcatgatgcgccgcaggtgtcagacacctcc
tccctgtacgttggcgatgcgggatttaacattcagtacctcgtcccgtcgatggcggag
cgcagtcagtacgacgtcatgcgcaccattgtcggcttcttggatcagttgctcgacgtg
aagctgttccctgaggcctcgccactgcaccgcgctgtggtgaccaacagcaaggatgtg
cgcctgtacgcctcggacgggtgcgtttcgtcgaagacgctgcgtggccacagcgacgta
gtgctctgctgtgccgtgagcagtgacggggcgtggattgccaccggggcaaaggataag
gaggtgcgtgtttggtcgaccgagaggtgcgagaccgttttgcgtggtgttggcgggcac
acggctgaggtgacgtccctatccttcaatgggaagcagacggacacgtacctgttgctt
ttctctgtctccagcgacgagaatctgcgcatgtgggacattggcgtccccctggcggag
cacacttcggcgaagcgcccgcagtcacgtgtggaggagatacagcaccgtagtggcgtg
aatgcggcccacagcggccctatctacacggtggctgtcgcgcccaacgaccagtacgtc
gcgaccggcggtaaggataagtcggtgaatgtgtggaacattaccggcaagaggatctac
cgcgaaggctccctgaaaggccaccggcgcggcgtctcgtctctcgcgttctcgcctgtc
gatcgcctcctggcatcggcctcgaatgacgggtcggtgcggctgtggtcgctggtgtcg
ctgacatgcctgaaggcgatgcaggtggaccgcacgtcggtgctgcagctgagcttcttc
aacaacggcacgcagatcgtgacaggtaacgccgagggcgtgctgcgtgtctgggccatc
acatcctcggagtcggtctggtcggcggaggcgcacacggagaagatatgggctttggcg
gtcgaggagcgcgcctcctcgggcgagacgattttctactccggcgccgccgacggcgtt
ttcgttgcgacggaggactacaccgccgaggaggtggcccgcgtgaaggaggagcggcac
agcatgattctgcaggagcaggcgcttgccaatgcccttcgcaagggcgcattctcagag
gcgttcatgctggccctgcggctgagtcatccgcgccacctccgtcaggtgcttgttcga
tggtgtgccaaggacgcgcgccagtgcgagagcacgcttcgcggggagcttctgcccggc
cttgacaccgagcagatgacacggctgctgcagtatacgcgagagtggatcacgaacagc
cgtcactgcatggtggccactctggtgctttacgtgctaatatcttcacgccactttgag
gcagtcgcgcaggtgccgtcgatggcgtcactgattgagccgctgttagcccacacgcgc
aaacacagccagcgccagcacgaccttcttcggcgcacctactatatcgactacgtcatc
cgcggccttgccccggacgccctgacgtcgctacctccattcgtgtatcgagatggcggc
caaaatgaggagtcgccactgaccaagcgcgtgcgcgccgagtga
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