Leishmania orientalis: 92360404
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Entry
92360404 CDS
T10351
Symbol
LSCM4_04486
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
loi Leishmania orientalis
Pathway
loi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
92360404 (LSCM4_04486)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loi03400
]
92360404 (LSCM4_04486)
DNA repair and recombination proteins [BR:
loi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
92360404 (LSCM4_04486)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
SLX1_C
Motif
Other DBs
NCBI-GeneID:
92360404
NCBI-ProteinID:
XP_067062679
UniProt:
A0A836HID1
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All DBs
Position
25:complement(<610893..>612989)
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AA seq
698 aa
AA seq
DB search
MDTRFHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCC
VSGFTDDRAALKFEWCWQHPTASARLKHTIHFITGLRQLPYAVATLHLLVRASLFCQLDL
TLHIFEPALLQEATARAEVFLAARRGAVAVGGGLRADSPQAGTQQHSQRSASVQGRSDRS
ATPPPPALDSQGSAQDAPLPPALAAIAASPHVLPPLTPSLLFHVEVTTRQAFEDAHLSHD
RCLLLPSLGAGVDVGEAGKGGGHVGAAAGTFCPYDVSLLSQAARAEWSRISFASGSDDEG
TARPASCCHSAGSRTPSPRRACSEALPALLGYRSEELAVDGVPDASPDSNVGDGAASRSL
SSSPPPPMSSQRWASPPPLPPAINASTSLAGDASNGSVTAACPSFTAAAPAPLPRIPLRF
ADYCEVDFARAHAEEQQLLRHGLLPCSLCALPLQPSCVAYCSRAPFCALRCHLSCLAVWM
LYAEAEAAATVDGADTRPALSSQASPVPISPHRRLIPCQPCPCPLCGVLLHWGSIVKELK
KRVVVERRLQAAQRRLRMEKRWHARLDRIKPVKRSAGAVTQRRQRKGVIATAQSKIAGEV
PGAALTASPPTIHAGPALRDAPQACSLSSLGAPPSTSFAASLSCPSPRISSVASSPTVNT
SPIPRPGGAPTTPTADAAVPDASFLSLTDFCEDDWLLP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcgcttccactgtgtgtatttgctgaccagcctcgaccctcagtgtgagggc
gacttttacataggctacaccgtgaatcccttacgacggctgcggcagcacaatggcgag
ctcgttaacggtgcccgtcgcacgagtcgccgtggccgtccgtggacgattgtgtgctgt
gtctcgggcttcaccgacgatcgagccgcgctgaagttcgagtggtgctggcagcacccg
accgcatctgcgcggctgaagcatacaatccacttcatcacgggcctgcggcagcttccg
tatgcagtggctacgctgcaccttctggtgcgcgcctccctcttttgccagttggatctg
acgttgcacatcttcgagccggcacttttacaagaggcgacggccagggcggaggtgttc
ctggcggcgcgtcgaggcgcagtagccgtgggcggagggctgcgagctgactcaccgcaa
gcgggcacccagcaacattcgcaaagaagcgcgtcggtgcaagggcgctcagacaggagt
gcaacaccgccgccgcccgcgctcgactctcaaggaagcgcgcaggatgctccgctgccg
ccggcactcgctgccatcgcggcctcccctcacgttctccccccgctcactccgtcgctc
ttgttccacgtagaggtgaccacgcggcaggccttcgaggacgcccacctgagtcacgac
cggtgcctactgctgccaagcctgggcgcgggtgtagatgtgggagaggccgggaagggg
ggcggccacgtgggcgcggctgctggcaccttctgtccgtatgatgtctcgctgctgtcc
caagcggcgcgggcggagtggtcgcgcatttccttcgcctccggctcggacgacgagggc
acggcgcgacccgcctcctgctgtcactctgcaggatcgcgcacgccatctccacggcgg
gcttgctcagaggccttgccggctctcctaggctaccgcagcgaggagctcgcagtcgac
ggcgtcccggatgcgagtccagacagcaatgtcggcgacggcgcggcgtcccgctctctc
tcctcttctccgccaccaccaatgtcttcgcagcgatgggcgtcgcctccacctctgcct
ccagccatcaacgcgtccacatcgcttgcaggggatgcgtccaatggaagcgtcacggct
gcctgcccctcgttcacggcggcggcacccgccccactgccccgcatcccactgcgcttt
gcggactactgtgaggtggactttgcacgggcgcacgcagaggagcagcaactcctccgt
cacgggctgctgccgtgcagtctctgcgcgttgcctctgcagccctcgtgcgtagcgtac
tgcagccgggcacctttctgcgccctgcgctgccatctgagctgcttggcggtgtggatg
ctgtatgccgaggcagaggcggcagccactgtagacggcgcggacaccagacctgcgcta
agttcgcaagcatctccggtacccatatcaccgcaccgtcggctgatcccctgtcagcca
tgcccgtgccccctctgcggtgttctgctgcactggggctcgatcgtgaaggagctgaag
aagcgagtggtcgtggagcggcgcctacaggcggcacagcggcgcctccgtatggagaag
cggtggcacgcgcgcctggaccgcatcaagccggtgaagagaagtgccggcgcggtgacg
cagcgtcggcagcggaagggggtgatcgctacagcgcagtcgaaaattgccggagaggta
cccggcgccgctttgactgcatcaccgcctaccatccacgcgggaccggcactgcgcgat
gcacctcaggcgtgttcgctgagctctctgggcgcaccgccctcgacatcattcgcagcg
tctctctcctgcccctctcctcgcatctcgtcggtcgcgtcgtctcctacggtgaatacg
tcaccgatccctcgccccggtggcgcccccaccacccctactgctgatgctgcggtgcct
gacgcgtctttcttgtctctgacagacttctgcgaggatgactggctgctgccatga
DBGET
integrated database retrieval system
