Leishmania orientalis: 92360460
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Entry
92360460 CDS
T10351
Symbol
LSCM4_04542
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
loi Leishmania orientalis
Pathway
loi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92360460 (LSCM4_04542)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loi03019
]
92360460 (LSCM4_04542)
Messenger RNA biogenesis [BR:
loi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92360460 (LSCM4_04542)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
92360460 (LSCM4_04542)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
92360460
NCBI-ProteinID:
XP_067062735
UniProt:
A0A836GR15
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Position
25:complement(<817901..>819829)
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AA seq
642 aa
AA seq
DB search
MSNIKKVQTEADRLLKKVNEGLDAYDELHEKLANAPNASAKERLEGDLKRELKKLQRHRE
AMKSFMQNDDYKEKPKMQVSRKKIEERMETFRAIEREMKTKAFSNEGLASAALEKTDSAT
EQWLKDAIEEGRKKIELLEYEVQKANNGRVRRGKQQQKSEYQVRLENLQTHFFKWESLLR
MVNNEELDTDEVDDLQESIQKVLEDDVDLEVMEDMSIYDSFDIPEPKAKPVVPFDVSDYE
DKKAQSPKTAIKAKTPMSTLQAKASPFITSPKETGTSPAVVKGASPTPVSPSVLPPASTQ
APQKQQKPQQQPAAFSNLADNGEEETVPEWMDDDMDTANDDTFGDDAMSGGITIGSLAEM
ASATNKVAQDWERPHKPIGPPEPKTVKLADHSYAASEEKPKPTPPAAAPTLNAWERRAAE
QQSRIKAQQQQYASDAASSVAPSGPVAAAAEATVLEAAAPPLGHSAATTSSSTLAGSTHT
DPIQPFPPIPGAAPGSKFTPKKIHELLDMSLGNLPHTLDVQRQRPYEPPNAIDAIPYFPQ
EVLPVLSNKDVYHHMDLDTLFFIFYYHQKSYQQYFAAKELKARSYRYHTKQQRWYQRLER
PQTTTETEERGSYTFFDFEDKWDHDRVDDFLFEYKYLENELH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacatcaagaaggtgcagacagaggcggaccgcctcctcaagaaggtaaatgag
ggcctcgacgcgtatgacgaactgcacgagaagctggctaacgcgcccaacgcaagtgca
aaggagcgcctcgagggcgatctcaagcgtgagctgaagaagctgcagcgccaccgcgag
gccatgaaaagcttcatgcagaatgacgactacaaggagaagccgaagatgcaagtctcg
cggaagaagattgaggagcgtatggagacgtttcgcgccatcgagcgcgaaatgaagacg
aaagccttcagcaacgagggattggcctccgccgcgctggagaagacggactcggccaca
gaacagtggctgaaggacgcgattgaggagggccgaaaaaagatagagctgctggagtac
gaggtgcagaaggcgaacaacggccgcgtgcgccgtgggaagcagcagcagaagtccgag
taccaggtgcgcctcgagaacctgcagacgcatttcttcaagtgggagtcgctgttgcgt
atggtgaacaacgaggagctcgacaccgatgaggtggatgacctgcaggagtcgattcaa
aaggtgctcgaggacgacgtcgatttggaggtgatggaggacatgtccatctacgatagc
ttcgacataccggagccaaaggcaaagcctgttgtgccctttgacgtcagcgactacgag
gacaagaaagcgcagtcgcccaagacggccatcaaggccaagacacccatgtccacgctg
caggcaaaggccagcccgttcatcacctctccgaaagaaacagggacgtcgccggccgtg
gtcaagggtgcgtctcctaccccggtctccccgtcggtgctgccgccggcgtccacgcaa
gcgccgcagaagcagcagaagccgcagcagcagcccgccgccttcagcaatctggcagac
aacggcgaggaagaaacagtgccggagtggatggatgacgacatggacaccgccaacgac
gacacctttggcgatgacgccatgagtggcggtatcacgatcggctcgctcgctgaaatg
gcctcggcgacaaataaggtggcgcaagactgggagaggcctcataagcccatcgggccg
ccggagcccaagacggtgaagttggccgaccacagctacgctgcatcggaggagaagccg
aagccgactccgcctgccgcggcgccgacgctgaacgcgtgggagcggcgcgccgccgag
cagcagagccgaataaaggcacagcagcagcagtacgcctccgatgccgcctcgtcggta
gcgccatccgggccggtggctgcggccgccgaagcgactgtgctggaagcagcggcaccg
ccgctggggcactcagcggcgacgacgtcttcgtcgaccctggccggcagcacccacaca
gaccccatccaacccttcccgcccatccctggtgccgctcccggctccaagtttacgcca
aagaagattcacgagctcttggacatgtcgctcggtaacctgccgcacacgctcgacgtg
cagcggcagcgcccctacgagccgccgaacgcgatcgacgcgatcccgtacttcccgcag
gaggtgctgccggtgctgtccaacaaggatgtctaccatcacatggacttggacacccta
ttcttcattttctattaccaccaaaagtcgtaccagcagtactttgccgccaaggagctc
aaggcccgctcctaccgctaccacacgaagcagcagcggtggtatcagcggctggaacgg
ccgcagacgacgacagagacagaggagcgcggctcctacacctttttcgactttgaagac
aagtgggaccacgaccgggtcgacgacttcctctttgaatacaaatacctcgagaatgaa
ctccactga
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