Leishmania orientalis: 92360733
Help
Entry
92360733 CDS
T10351
Symbol
LSCM4_04818
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
loi Leishmania orientalis
Pathway
loi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92360733 (LSCM4_04818)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loi03019
]
92360733 (LSCM4_04818)
03041 Spliceosome [BR:
loi03041
]
92360733 (LSCM4_04818)
Messenger RNA biogenesis [BR:
loi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
92360733 (LSCM4_04818)
Spliceosome [BR:
loi03041
]
Complex B
Other components
Prp19-related factors
92360733 (LSCM4_04818)
Complex C
92360733 (LSCM4_04818)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
Suf
HAT_Syf1_M
NRDE-2
Motif
Other DBs
NCBI-GeneID:
92360733
NCBI-ProteinID:
XP_067063246
UniProt:
A0A836HKP0
LinkDB
All DBs
Position
23:856231..858615
Genome browser
AA seq
794 aa
AA seq
DB search
MDGDPRVSALQWEVAKEASTSPKTWAELARTTAAAAAADPVERANAVTLVYERAVRAFAS
SYKLWMAYIRYRQQETSRLCRPNEWFQSVREVYERALAELPKMPMLWVGYMEFVAASVVP
RVTMARHVLARALAELPATQHHLMWKVAKRWCAMPVVPSATVQAVWRLYLSFQRSLHAKR
EYFQVLAQKGDFNVFLQECVHLGLPDTSNKGAVDERDLLLSDVSFWETVQTALQGKGWRF
TGDIGPLRQLIDLGKSRCASPVELSMAFAVFLYGQGHMREGRRELRRLLDEAPEAQTLTS
LFHLAVEVEDQLVESFAVDPNLKQLDDAAYNGVVQHLFGDGDPLSHLERLVREFPLLLNQ
AQLRNSPHNATLWLKRVELVQEDTYAGRSTFDDLVALYRQAIQQCTAGMSRVEGAAAQLF
SSYAQTLIRGGKLDSAILVLSEGTWCVPFTSAALNVQLLGLLVEAQLMSSSSPLSVRDAL
AERLTSGTRSGGSKRGRSGLLQSSAALPHVIHHPHAWIMWCDLCASYDAVNAAAWRHLVE
ALASSSAFSAEAACYVAHKAFVCRQESMAVMMLERAVAATRQQPTAHLFVLEQYLSFLHV
RDGRKVPLHQFREVFSLVQQVTPVAIRTTPAAVIDLHVSCAYMEAAIGLYGTAVRMMQEI
SLVAIAALRGRDEHLRVLQAILEHSITFTEQRRGYDSVRTYCGALVQRLQHALLLQRVAL
HWAAIEKRSGNTAQAHLILDACGDSQDPSTEHGEVYWRLWESLCTSVEEFEKVARRRQQA
AIRFGKRGSAKGPV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacccgcgagtgagtgccctgcagtgggaggtagcgaaagaggcctcgact
tcgcccaagacatgggcagagctggcccgcaccaccgccgcggccgctgcggctgatcct
gtggagcgagcgaacgccgtaacgctggtctacgagcgcgctgtgcgtgcgtttgcctcc
tcctacaagctgtggatggcatacattcgctaccgccagcaggagaccagccgactttgc
cggccgaacgagtggttccagtctgtgcgtgaggtgtatgagcgggcgttagcggagctt
ccaaaaatgccgatgctgtgggtgggctacatggaatttgttgctgcctcggtagtgcca
cgtgtgacgatggcgcggcacgtactcgcgcgtgcccttgcagagttgccggcaactcag
catcatcttatgtggaaagtcgcaaagcgctggtgcgctatgcctgtcgtgcccagcgct
acagtgcaagctgtttggcggctttacctgtcctttcagcgctcgctgcatgctaagcgc
gagtactttcaggtgctcgcgcagaagggcgacttcaacgtgttcctgcaagagtgcgtg
cacctgggactgcccgatacgtcgaacaagggcgccgtcgacgagcgcgacctgctcctg
agcgacgtgagcttttgggagacggtgcagacggcactgcaggggaaaggctggcgcttc
acaggcgatatcggccctctgcgtcagctgatcgatcttggaaaatcgcggtgcgcttcc
ccagtagagctctctatggcctttgccgttttcctttacggccaggggcacatgcgagag
ggccgaagagagctgcgtcggttgttagacgaggccccagaggctcagactctgacctcg
ctcttccaccttgccgtggaggtggaggatcaactcgtggagtccttcgcggtggacccc
aatctcaagcagctcgacgacgccgcgtacaacggcgtggtgcagcacctcttcggtgac
ggcgacccgctcagccacctcgagcgtcttgtgcgcgagtttccgctgctcctcaaccag
gcgcagctacgcaatagcccacacaatgcgacactgtggctgaagcgtgtagagctggtg
caggaggacacctatgcgggccgctccacctttgacgatctcgtcgctctgtatcgccag
gctattcagcagtgcactgcagggatgtcgcgtgtggaaggcgcagcggcgcagctgttc
tcttcctatgcccagactctcattcgtggcggcaagctggacagcgccatcctggtgctc
agtgaggggacgtggtgtgtgcccttcaccagtgccgcgcttaacgtgcagcttcttggt
cttcttgtggaagcgcagctcatgtcgtcctcctcccccttgtccgtgcgggatgcgctg
gcggagcggctgaccagtggcactcgcagcggaggttcaaagcgcggccgaagcggacta
ctgcagtcgagtgcggccctgccccacgtgatacaccacccacatgcgtggataatgtgg
tgtgacctttgcgcttcctacgacgccgtgaacgcggccgcttggcggcaccttgtcgag
gcgctcgccagctcctccgccttctccgctgaggccgcctgctatgtagcccacaaggcc
tttgtttgtaggcaagagtcgatggctgtcatgatgctagagagagccgtcgctgccacg
cggcagcagcctaccgcgcatctgttcgtgcttgagcagtacctctccttcctgcacgtc
cgtgacggtcgaaaggtgcctctgcatcagtttcgtgaggtgttcagccttgtgcagcaa
gtgaccccggttgccatacgcactacaccggcagccgtcatcgacctgcacgtcagctgt
gcttacatggaggcagccatcggcctctacgggacagccgtccgcatgatgcaggagatt
tccctagtcgctattgcagcgcttcgggggcgtgatgagcacctccgtgtcctgcaggcc
attcttgagcactctatcaccttcacggagcagcgcaggggctacgattcagtgcgcacc
tactgcggagcgctcgttcaacgactccagcacgcacttctgctgcagcgtgttgcgctt
cactgggctgcgatcgagaagcgctctggcaacacggctcaggcgcatcttatcctcgac
gcttgcggggacagccaggacccgtccacggagcatggcgaggtgtactggcggctgtgg
gagtctctctgcacaagtgtggaggagtttgaaaaagtggctcggcgtcggcaacaagcg
gcgattcgcttcggcaaacgtgggagtgcgaaggggccggtctaa
DBGET
integrated database retrieval system
