Leishmania orientalis: 92360738
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Entry
92360738 CDS
T10351
Symbol
LSCM4_04823
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
loi Leishmania orientalis
Pathway
loi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92360738 (LSCM4_04823)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loi03019
]
92360738 (LSCM4_04823)
Messenger RNA biogenesis [BR:
loi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
92360738 (LSCM4_04823)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
92360738 (LSCM4_04823)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
92360738
NCBI-ProteinID:
XP_067064613
UniProt:
A0A836H0N6
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All DBs
Position
14:60280..61167
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AA seq
295 aa
AA seq
DB search
MSSGVVIVGDSICGGNTDQKLCTGLEVYLRGFNTFSGNHPSDVALLHEGAGEIVAAINGH
IEVTDRVISVKGLLPRYQPEIGDVVVGRISEVTGNKWQVDVNSTQSAVMLLSNVTEPGGI
LRRRGRDDELGMRQLFDQGDLVAAEVQRITPDGVVSLHTRAAGKYGRLSGLGILVSVRPS
LVKRAKHQFVELAEYSTQLIIGMNGNIWVCAVHSCAADTSGKEHAADARQNVARVVNCIK
ALGAARVQINPASIEASVVASLEAGLSAFDLSIEKHQGALLARVADTVGMKRRRQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccggtgtagtgattgtgggtgactctatctgtggaggcaacactgatcaaaag
ctctgcacaggtcttgaagtgtatctacgcggattcaacacattttccggaaaccatcca
agtgacgtagcgctgcttcacgaaggggcaggcgaaatcgtagctgctattaatgggcat
atagaagtgaccgatcgtgtcatatcggtgaaagggctgctgccacgctaccagcccgaa
atcggtgatgtggtggttggtcgaatttcggaagtgacaggcaacaagtggcaagttgat
gtgaattcgacacagagcgcagttatgctactctcaaacgtaacagagcctggaggcatt
ttgcgacgccgaggccgggatgacgagctaggtatgcgtcagcttttcgatcaaggtgat
ctggttgcggcagaggttcagcgcatcacgcccgatggtgtcgtgtcactccatacgcgc
gcagccgggaagtatggccgactttcaggacttggtatattggtgagcgttcgtccctcc
ttagtcaagcgcgctaagcatcagtttgtggaacttgccgaatatagcacacagctcatc
attggtatgaatggtaacatatgggtttgcgcagtgcattcctgcgctgccgacacgagt
gggaaggagcacgctgccgacgcgcgtcaaaacgtggcacgtgttgtcaactgcatcaaa
gcactaggagcggcgcgagtccagattaacccagcatcaatagaggccagcgttgtggcg
tcactagaggcaggcttgtcggcgttcgacctttctattgagaaacaccaaggcgcacta
ctggcacgcgttgccgacacggtaggaatgaagcgccgccgacagtag
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