KEGG   Leishmania orientalis: 92360893
Entry
92360893          CDS       T10351                                 
Symbol
LSCM4_04984
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
loi  Leishmania orientalis
Pathway
loi03018  RNA degradation
loi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:loi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92360893 (LSCM4_04984)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    92360893 (LSCM4_04984)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loi03019]
    92360893 (LSCM4_04984)
   03041 Spliceosome [BR:loi03041]
    92360893 (LSCM4_04984)
Messenger RNA biogenesis [BR:loi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     92360893 (LSCM4_04984)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     92360893 (LSCM4_04984)
Spliceosome [BR:loi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    92360893 (LSCM4_04984)
SSDB
Motif
Pfam: LSM Cadherin_2 DUF6800
Other DBs
NCBI-GeneID: 92360893
NCBI-ProteinID: XP_067062262
UniProt: A0A836KHB0
LinkDB
Position
26:complement(24941..25285)
AA seq 114 aa
MSPCAVTERQLELRRLNHRVAKIMSAEAAHILKKKEGILSLEKYLDRKVVVSQKGHEVHG
VLKGFDNNVNLVLADAELWHRNTRIRTIGACVVRGGPVNLVLSGDVAVIANPFS
NT seq 345 nt   +upstreamnt  +downstreamnt
atgtctccctgcgcagtcacggagaggcagttggagctgagacgactgaaccatagagtc
gcgaagataatgtctgcggaggcggcgcacattctcaagaagaaggagggtattttgtcc
ttggagaagtacctcgatcgtaaagtcgtggtttcccagaaaggccacgaagtccacggc
gtcttaaaagggtttgacaataatgtaaacttggttcttgccgacgcagagctttggcac
cgcaacacgcgcatccgcaccatcggcgcttgcgttgtgcgcggtggtcctgtaaatctc
gtcctctccggtgacgttgctgtgattgcaaaccccttctcttag

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