Leishmania orientalis: 92360893
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Entry
92360893 CDS
T10351
Symbol
LSCM4_04984
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
loi Leishmania orientalis
Pathway
loi03018
RNA degradation
loi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92360893 (LSCM4_04984)
09123 Folding, sorting and degradation
03018 RNA degradation
92360893 (LSCM4_04984)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loi03019
]
92360893 (LSCM4_04984)
03041 Spliceosome [BR:
loi03041
]
92360893 (LSCM4_04984)
Messenger RNA biogenesis [BR:
loi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92360893 (LSCM4_04984)
mRNA degradation factors
5'-3' decay
Lsm complex
92360893 (LSCM4_04984)
Spliceosome [BR:
loi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
92360893 (LSCM4_04984)
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Gene cluster
GFIT
Motif
Pfam:
LSM
Cadherin_2
DUF6800
Motif
Other DBs
NCBI-GeneID:
92360893
NCBI-ProteinID:
XP_067062262
UniProt:
A0A836KHB0
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Position
26:complement(24941..25285)
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AA seq
114 aa
AA seq
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MSPCAVTERQLELRRLNHRVAKIMSAEAAHILKKKEGILSLEKYLDRKVVVSQKGHEVHG
VLKGFDNNVNLVLADAELWHRNTRIRTIGACVVRGGPVNLVLSGDVAVIANPFS
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctgcgcagtcacggagaggcagttggagctgagacgactgaaccatagagtc
gcgaagataatgtctgcggaggcggcgcacattctcaagaagaaggagggtattttgtcc
ttggagaagtacctcgatcgtaaagtcgtggtttcccagaaaggccacgaagtccacggc
gtcttaaaagggtttgacaataatgtaaacttggttcttgccgacgcagagctttggcac
cgcaacacgcgcatccgcaccatcggcgcttgcgttgtgcgcggtggtcctgtaaatctc
gtcctctccggtgacgttgctgtgattgcaaaccccttctcttag
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