Leishmania orientalis: 92361303
Help
Entry
92361303 CDS
T10351
Symbol
LSCM4_05428
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
loi Leishmania orientalis
Pathway
loi03082
ATP-dependent chromatin remodeling
loi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
92361303 (LSCM4_05428)
03083 Polycomb repressive complex
92361303 (LSCM4_05428)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loi03036
]
92361303 (LSCM4_05428)
Enzymes [BR:
loi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
92361303 (LSCM4_05428)
Chromosome and associated proteins [BR:
loi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
92361303 (LSCM4_05428)
HDAC complexes
Sin3A-HDAC complex
92361303 (LSCM4_05428)
BRAF-HDAC complex
92361303 (LSCM4_05428)
REST complex
92361303 (LSCM4_05428)
SHIP complex
92361303 (LSCM4_05428)
MiDAC complex
92361303 (LSCM4_05428)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
92361303 (LSCM4_05428)
Heterochromatin formation proteins
Other heterochromatin formation proteins
92361303 (LSCM4_05428)
Chromatin remodeling factors
NuRD complex
92361303 (LSCM4_05428)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
DUF1256
Motif
Other DBs
NCBI-GeneID:
92361303
NCBI-ProteinID:
XP_067062937
UniProt:
A0A836HJM3
LinkDB
All DBs
Position
24:<523803..>525413
Genome browser
AA seq
536 aa
AA seq
DB search
MASSKPLPVLSAASSAWIGAACSLHSSHGRSLSCHTLAKPDDASVGSPCVSSTSQTSAAS
EESAATSKSPQALSAPVSPSAGRRVVYFVDHSVTAIAYAEGHLMRPSRVRALHALVHSLG
LDDAGCMTVCHARPATEEEMGAFHRGAYLECLRQAPVICGNPLDEMSLAFQKEFDVPFAS
QRGDCPLFPEVWALVTSQAGASLACAEALVRGDADVAMNWAGGMHHAAAAHASGFCFVND
IVLCIRRLLRHYQRVLYIDLDVHHGDGVEGAFYGNHRVMTLSLHQFGSGFFPGTGDYPTR
ETADSFAVNVPLPMRTGDAAYLLSFRTALSSVVQCFDPEAVVLQCGADTITGDLIGRLCV
TTLAHTQCVADVLSLERPTVLLGGGGYHVFHTARCWAIHTATALGRTAAQLPLYIPRTDP
YYMDYRRECTPKRPTLHVFLDPDVDDPLPLEDSLAFWRQLCRSIQWQMRTARFVRQRFSR
TVQVCRQRRSAFLRQFAAQDAGGESGVAVSGAKRPRSKATTERGAEEGVEDRVVSA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcgaagccgctccctgtgctctcggcggcgagctcagcgtggatcggagca
gcctgctcgcttcactcatcgcacggcagatcgctttcgtgccacactttggcgaagcct
gatgatgcctctgtggggtcaccgtgcgtgtcctcgacgtcacagacctcagcggcgagc
gaggagagcgccgcgacatcgaaatcgccgcaggcacttagcgcaccggtgtcaccctcc
gctgggcggagggtggtgtactttgtggaccactccgtcactgccatcgcctatgcagag
ggccatttgatgagaccgtctcgcgtacgtgcgctgcatgcgcttgttcactccttgggc
ctcgacgatgcaggatgtatgacggtgtgccatgctcgtccggcaacggaggaggagatg
ggggcttttcaccgcggcgcatacttagagtgcctgcgtcaggcgccggtcatttgtgga
aatccgctagacgagatgtccctagcttttcaaaaggaatttgacgtgcccttcgcgtct
cagcgcggcgattgtcctcttttcccagaggtgtgggcgctggtcaccagccaagccggc
gcctcgcttgcctgtgcagaggccctcgtacgcggtgatgccgatgttgccatgaactgg
gcaggcggcatgcatcacgctgccgctgctcacgcaagcggattctgctttgtgaatgac
attgtgctgtgtatccgccggctgctgcggcactaccaacgcgtcctctacatcgacctg
gacgttcatcacggggacggcgtggagggggccttttatggcaatcaccgcgtgatgacg
ctctccctgcaccagttcggcagcggcttcttccccggcaccggtgactacccaacgcgt
gagacagccgacagcttcgccgtcaacgtgccgctgccgatgcgcacgggcgatgctgcg
tacctcttatcgtttcgcaccgcactctctagtgtggttcagtgctttgacccagaggcg
gtggttttgcagtgtggcgcggacaccataacgggcgacctcattgggcggctttgtgtg
actactctggcgcacacgcagtgcgtagccgatgtgttgtcgctcgagcggccgacggtg
ctgctgggtggaggcgggtatcacgtatttcacacggcgcgctgctgggcgatccacact
gccaccgcgctgggccgcacagctgcacagttgcccttgtacataccgcgcacggacccc
tattacatggattaccggcgagaatgcacgcccaagcggccgacacttcatgtctttctc
gaccccgacgttgatgatccgctgccgctggaagacagcttggcgttctggcgtcagctc
tgtcgcagcatccaatggcagatgcgcactgcccggtttgtgcggcagaggttttctcgc
acagtacaggtttgccggcagcgacggtcagcttttctgaggcagtttgcggcgcaagat
gcagggggagaatctggcgtcgccgtgagcggcgctaagcgcccccgctcaaaagctaca
acggaacgtggtgccgaggagggggtggaggacagagtggtttcagcgtga
DBGET
integrated database retrieval system
