Leishmania orientalis: 92362611
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Entry
92362611 CDS
T10351
Symbol
LSCM4_06764
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
loi Leishmania orientalis
Pathway
loi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
loi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
92362611 (LSCM4_06764)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loi03021
]
92362611 (LSCM4_06764)
03019 Messenger RNA biogenesis [BR:
loi03019
]
92362611 (LSCM4_06764)
Transcription machinery [BR:
loi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
92362611 (LSCM4_06764)
Messenger RNA biogenesis [BR:
loi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
92362611 (LSCM4_06764)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_9
zf-CCHC_2
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
92362611
NCBI-ProteinID:
XP_067065388
UniProt:
A0A836GQ08
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Position
9:complement(343865..344875)
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AA seq
336 aa
AA seq
DB search
MFVDDAAGTHFDFEDTLPKVQPRTEKKLEICQDFQRGRCRFGDTCPQRHIISAYRTVQTK
VCKHWLRGACVNGDNCLYLHEYDNRYVPQCAFFERVGECTNPECPFLHTRPNESLPECAA
YRRGFCPMGPSCRLRHVKRESACPYYLAGFCPLGPRCPLGHPIQERYDRDAVSKRILAKM
IVERADDPTFNRSATCYRAGCFDPGHLAPDCPGPQHSVLHKALGEIQEPGQPIGTLENGG
RGSGGASHRRCFLCDEEGHTMKDCPTNTHRNQHRSGGSGGPGAPQGNSGGAGIANRRRLR
REGGAGVGGGPSGGGGGGGTGFGGGGGRRRPGRDHG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttgacgatgccgccggcacgcacttcgactttgaagacacgctgcccaaggtg
cagccccgcacggagaagaagctagaaatctgccaagacttccagcgcggccgctgccgt
tttggcgacacctgcccccagcgccacatcatctcggcttatcgtaccgtgcagacgaag
gtatgcaagcactggctgcgtggtgcctgcgtgaacggggacaactgcctttaccttcac
gagtacgacaaccgctatgtcccgcagtgcgccttctttgagcgcgtgggcgagtgcacc
aacccggaatgccctttcctgcacacgagaccaaacgagtcgctgccagagtgcgccgca
taccgccgcggcttctgcccaatgggccccagctgccgccttcgacacgtgaagcgggaa
tcggcgtgcccatactacctcgctggcttctgcccgttaggcccgcgctgtccgctgggg
caccccatccaagagcgctacgaccgcgacgccgtctcgaagcgcatcctggccaaaatg
attgtggagcgcgccgatgacccaaccttcaaccgcagcgcaacctgctaccgagccggc
tgctttgaccctggccatctcgcgccggactgtccaggtccgcagcacagcgttctgcac
aaagctcttggcgagattcaagagccagggcaacccattggcactttggagaatggtggg
cgcggcagtggcggcgcctcgcatcgtcgctgcttcttgtgtgacgaagaggggcacacg
atgaaagactgtccgacaaatacgcaccgtaatcagcaccgcagtggagggagtggcggt
cctggcgccccacaaggcaatagcggtggagctggaatagctaaccgacggcgcttgcgg
cgagaaggcggtgccggcgttggaggcggccctagtggtggtggtggtggtggtggtact
ggcttcggtggcggaggcggtcgacgacgccccggtcgcgatcacggctaa
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