Legionella oakridgensis: Loa_00125
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Entry
Loa_00125 CDS
T03928
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lok
Legionella oakridgensis
Pathway
lok03030
DNA replication
lok03410
Base excision repair
lok03420
Nucleotide excision repair
lok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Loa_00125
03410 Base excision repair
Loa_00125
03420 Nucleotide excision repair
Loa_00125
03440 Homologous recombination
Loa_00125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lok03032
]
Loa_00125
03400 DNA repair and recombination proteins [BR:
lok03400
]
Loa_00125
Enzymes [BR:
lok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Loa_00125
DNA replication proteins [BR:
lok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Loa_00125
DNA repair and recombination proteins [BR:
lok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Loa_00125
NER (nucleotide excision repair)
GGR (global genome repair) factors
Loa_00125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AHE65716
UniProt:
W0BAJ6
LinkDB
All DBs
Position
complement(113383..116064)
Genome browser
AA seq
893 aa
AA seq
DB search
MSKPLVLVDGSSYFFRAFHALPPLTNSKGQPTGAIYGVANMIKRLIKDYQPERMAVIFDA
KGKTFRDEWYPDYKAHRPPMPAELSSQFNPLQSVLAAMGLPLLTVEGVEADDVIGTLTKQ
ATTQGLSVLISTGDKDMAQLVNPQVTLINTMTGTVLDGDGVKEKFGVRPDQIIDYLTLTG
DPSDNVPGVKKCGPKTAVNWLNEYKTLDNLIQHADDIGGKIGENLRVALSHLPLAKKLVT
IQTNLELPVTIDDLIPRAIDREQLIALAREFEFKTWLKELLNEESQNNQAATNAPKQALE
IITTQSQLHDWIEKLQSCSEFCVDTETTNLDAICASLVGIALAIDANFPVYIPLTHDDNS
QQLEREEVLTVLKPILENPNIKKIGQNLKYDYTVLKNHGITLRGIFCDTMLESYVLNSTA
ARHDMDSLALKYLGYKTISFTDIAGVGAKQLRFNQIPVAKAAPYAAEDASITLKLHQTLY
PMMDERLRSVFHEIEMPLLTVLAEIERHGVLIDTTTLAKHGERLKAEIVDLEKEAWQLTG
KTFNLNSPKQLQDILFNEQQLPVLAKTPTGQPSTAESVLQELAFDYQLPAVILRYRGLSK
LVSTYIDALPKRINPQTHRVHTSYNQAVAATGRLSSSDPNLQNIPIRTEEGRLIRKAFIA
PANHLLLAADYSQIELRIMAHLSKDANLLKAFAQGWDIHAATASEIFSVNLQEVTAEQRR
RAKAVNFGLIYGMSAFGLAKQLGVEREDAQSYIDKYFERYPGVLEYMERTRKQAHQQGYV
ETLFGRRLHLPEINARNMMRQRAAERTAINAPMQGSAADIIKKAMLAIANWQNKQSIKAR
MIMQVHDELVFEIQDDAVDEIKTTIKQLMEHTVELSVPLVVSIGTGKNWDEAH
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcctttggttctggttgatggatcatcctatttctttcgcgcttttcatgca
ttacccccgctgacaaattctaaagggcagcctactggtgcaatttatggggttgccaat
atgattaagcgtttgattaaagattatcagcctgaacgtatggccgtcatttttgatgca
aaaggcaaaacatttcgtgatgaatggtatcctgattataaagcccaccgtcctcctatg
cctgctgaattaagcagtcaatttaatcccttgcaatcggtacttgcagccatgggcttg
cctttattaaccgttgaaggtgtggaagccgacgacgtaataggcaccctgaccaaacaa
gcaacgacgcaaggcttgtccgttttaatctcaacgggtgacaaagatatggcgcaatta
gtcaacccgcaggttacgctcattaacacaatgacagggaccgtgcttgatggtgacggg
gttaaagaaaaatttggtgtaaggccggatcaaatcattgattatctaacattgaccggg
gatccttctgataacgttccaggtgtaaaaaaatgcggccccaaaacggctgttaattgg
ttaaatgaatataaaaccttggataatttaattcaacacgccgatgatattgggggtaaa
attggcgaaaatctgcgtgttgccttatcgcatctaccacttgcaaaaaaattagtcacc
atacagaccaatcttgagttgccggtcaccattgatgatctgatccctcgcgcaattgat
cgtgagcaattaattgctcttgcccgtgaatttgaattcaaaacctggctaaaagaatta
ttaaatgaagaatcacaaaataaccaggcagcaactaatgcccccaaacaggcgttagaa
atcatcactacccaatctcagctccatgattggatagaaaaattacaatcctgttcagag
ttttgcgtggataccgaaacaaccaatctcgatgctatttgcgccagtcttgtaggaatt
gcattggctatagacgccaattttcctgtttatattcccctaacccatgatgataacagt
cagcaattagagcgtgaagaagtcctcaccgttctcaaaccaatccttgaaaaccccaat
ataaaaaaaattggtcagaatttaaaatacgattacaccgtattgaaaaatcatggcatc
acccttagaggcattttttgtgacaccatgctggaatcttatgtgttaaatagcactgcc
gctcgccatgatatggattcacttgccttaaaatatcttggttataaaaccatcagcttt
actgatattgccggcgtgggagcaaaacaactgcgatttaatcaaattcctgtggcaaaa
gcagcaccctatgcggcagaagacgcaagcattaccttgaaattacatcaaactctttat
ccaatgatggatgaacgcttacgcagtgtgtttcatgaaatagaaatgccgttgcttacc
gttcttgcagaaattgagcgccatggcgttcttattgataccacgactttggctaaacat
ggagagcgcctaaaagccgaaatcgtggatttggaaaaagaagcatggcaattaacaggt
aaaacatttaatttgaattcccccaaacaattgcaggatattttatttaatgaacaacaa
ttgccagttctcgctaaaaccccaactggtcaaccatcaacagccgaatctgtccttcag
gagctagcgtttgactatcagttacctgctgtaatcctgagatatcgcggtctaagcaaa
ttggtttccacctatattgatgcattaccaaaacgaatcaatcctcaaactcaccgcgtt
catacctcatataatcaggcagtagctgcaacagggcgcctttcttccagtgatcccaac
ttacaaaatataccgattcgtacggaggaagggcgtctgatccgcaaagcattcattgcg
ccagccaatcacttattattggccgcagattactcccagattgaattgcgcatcatggct
cacttatccaaagatgccaatttgctcaaagcatttgcgcaaggttgggacatccatgcg
gccaccgccagtgaaattttttctgtgaacttacaagaagtgacagcagagcaacgtcgt
agggcaaaagcagttaattttggtctaatatatggaatgtcagcatttggcttagccaag
caacttggggtcgaacgtgaagatgcgcaatcttatatcgacaaatattttgaacgctat
cccggcgtgttggagtacatggaaagaacacgcaagcaagctcatcagcaaggttatgta
gaaaccctatttggaagacgtttgcacttaccagaaatcaatgcccgaaatatgatgcgt
caaagggccgcagaacgtactgctattaatgctccaatgcaaggcagtgctgcggacatt
attaaaaaagccatgctggccattgccaactggcaaaacaaacaatccatcaaagcacgg
atgattatgcaagtgcatgatgagctggtttttgaaatacaggatgatgcggtggatgaa
ataaaaacaaccattaaacaacttatggaacacaccgttgaattatctgtgccactggtg
gtctctataggcactggcaaaaattgggatgaggcgcattaa
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