Legionella oakridgensis: Loa_00416
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Entry
Loa_00416 CDS
T03928
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lok
Legionella oakridgensis
Pathway
lok03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lok00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Loa_00416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lok03021
]
Loa_00416
03400 DNA repair and recombination proteins [BR:
lok03400
]
Loa_00416
Enzymes [BR:
lok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Loa_00416
Transcription machinery [BR:
lok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Loa_00416
DNA repair and recombination proteins [BR:
lok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Loa_00416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AHE65994
UniProt:
W0BC46
LinkDB
All DBs
Position
374756..375748
Genome browser
AA seq
330 aa
AA seq
DB search
MYTDINEMLTPKVLKVQSENPNHSRIVLEPLERGFGHTLGNALRRILMSSMPGSAITEAS
IDGVLHEYSTIEGVQEDVVNILLNLKEVAVKISVGREATLTLSKKGPCQVTAGDIQLTHG
VEILNPDFVIANLNEHGKLDMTLKVERGVGYRSTETFIRLPEDEIQEKSVGKLKIDSIFS
PVKKVAYFVDNARVENRTDLDKLTIDLQTNGTIDPEEAIRISASILQRQLHSFVDMKFEE
SRHDHKEQHQFEPILLRPVDDLELTVRSANCLKAENIYYIGDLVQKTETELLKTPNLGKK
SLTEIKDVLASRSLSLGMKLENWPPENLGE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtatactgatattaatgaaatgctgaccccgaaggttctgaaagtgcagtctgagaat
cctaaccattcacgtattgtgcttgaaccattggagcgtgggtttgggcacacacttggt
aatgctttacgacgaattttgatgtcgtctatgccagggagcgcaataaccgaggcgagt
attgatggtgtattgcatgaatacagtaccattgaaggtgttcaggaagatgttgtcaat
atacttcttaatctgaaggaagttgctgttaagatttccgtgggtcgcgaggctacgctc
actttgagtaaaaaaggaccctgtcaggttactgccggggacattcaattgactcacggt
gttgaaattctgaatcctgattttgtgattgcaaatctgaacgagcatggcaagctggat
atgactcttaaagtggaaagaggtgttggctatcgttcaactgaaacatttataaggttg
ccagaagacgaaatccaagaaaaatcagttggtaagttaaagattgacagcatattttca
ccagtcaaaaaagtggcttattttgttgataacgctcgtgttgaaaatcgtactgacttg
gataagctgactattgatttacaaacaaatggtactattgatcctgaagaagcgatacgc
atttcagcaagtatactgcaaagacaattgcattcgtttgtggacatgaagtttgaagaa
tcacgtcatgatcataaggaacagcatcaatttgaaccaattttgttgcgacctgttgat
gatttggaattaaccgtacgttcagccaattgtctgaaggccgaaaatatatattacata
ggggacttagtacaaaaaactgagaccgaattattaaaaacgcctaatctaggtaaaaaa
tccctgactgaaattaaggatgtgttggcatcacgatcattatcgctgggaatgaaacta
gagaattggccgccagaaaatcttggcgaataa
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