Legionella oakridgensis: Loa_00795
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Entry
Loa_00795 CDS
T03928
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
lok
Legionella oakridgensis
Pathway
lok02020
Two-component system
lok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Loa_00795 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Loa_00795 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lok03021
]
Loa_00795 (rpoN)
Transcription machinery [BR:
lok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Loa_00795 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AHE66363
UniProt:
W0B747
LinkDB
All DBs
Position
complement(716743..718146)
Genome browser
AA seq
467 aa
AA seq
DB search
MKPSLQLGLASQLSITPQLQQAIRLLKLSTLDLRQEIQQQVESNPMLESTSNELEHESLE
MVLEYEDDFVDFQWSPLYSRQGSGRDFKENSPTYEPIHRSETGLQDHLRWQLNMSPISDI
DRMIAEVIIDAIDDNGFLTLSLTDIHSSLNHHPYPLALKEIEVVLHRIQRLDPLGCGARN
LAETLLIQLEQLPQTTLHLKTARQIMENNLELLGRHKYRQLMKIYHIDKQAMENILDIIQ
HLNPKPGSAISREHTKYIIPDLIVEKKRNHWQVSLSQNVLPHLSINTQYASLIQRGNNHV
DNKFLKNNLQEARWFLKSIQSWQKTLLKVARYIVDYQQDFLEFGEEAMKPLILNEAALAL
NMHESTISRITTQKFIHTPRGVFELKYFFSNHIPTMQGGECSPTAIRALIKKFVAHENPE
APLSDGALAKQIAAQGIQIARRTISKYREEMRIPPVHARKSIRSNSY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgtcactgcagctgggtttagcgagccagctctctattactccccagcttcaa
caagctattcgattacttaaattatccacccttgatcttagacaagaaatacaacaacaa
gtcgaatctaatccaatgctggaatccacttcaaatgagctggagcatgaatcccttgaa
atggtcctggaatatgaagatgattttgttgatttccaatggtctccactgtattcaagg
caaggatccggccgtgattttaaggaaaatagccctacctacgaacctatccaccgctcg
gaaaccggattacaagatcatttacgatggcaattaaatatgagtcccatcagtgatata
gacaggatgattgccgaagtaattatcgatgctattgatgataatgggtttttaacactg
tccttgacagatattcatagcagcttaaaccaccatccctaccctctagccttaaaggaa
attgaagttgtattgcaccgcattcaacgcctggacccccttggctgcggtgctagaaat
ctcgctgaaacattactaatccaattagaacaattaccccagacgacgttacatttaaaa
acagccagacaaataatggaaaataatcttgaattacttggccgccacaaatataggcaa
cttatgaaaatctatcatattgataaacaggccatggaaaacatattggatatcattcaa
catctgaatccaaaacctggaagcgccatctcaagagaacatacaaaatatattattcct
gatttaatcgttgaaaaaaaaagaaaccattggcaagtcagtttgagtcagaatgtactg
cctcatctaagcattaacacacaatatgcgtcactcattcagcgcggcaataatcacgtc
gataataaattcttaaaaaataatttgcaggaagcacgctggtttttaaaaagcattcaa
agctggcaaaaaaccttattaaaagtagcccgttatatagtagactaccagcaagatttt
ctagaatttggcgaagaagcaatgaaaccgctgattcttaatgaagcagccttggctctt
aatatgcatgaatccacaatctcaaggataacgactcaaaaatttatccatactcctcgc
ggagtatttgagcttaaatattttttctctaatcatattcctaccatgcaaggaggcgag
tgttcaccgacggcaatccgtgctctcataaaaaaattcgtggcgcatgaaaatccagaa
gcgcctttgagcgacggtgcacttgcaaaacaaatagctgctcaaggcattcaaatagca
cgtcgtactattagcaaatatcgtgaagaaatgagaattccgcctgttcatgcacgaaaa
tcaattcgtagtaattcgtattaa
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